CX295734

Overview
NameCX295734
Unique NameCX295734
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length790
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig651 contig Ccv1_Contig651:254..1043. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: PHAE_PHAVU (Erythroagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=DLEC1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 64/208 (30.77%), Postives = 91/208 (43.75%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTTFPLPSSSLEEQNLA 610
            +GR  YS P+  W       A   T+FT  I   PN +  ADG+ FV     S P +                A    VE DT  N +W DP   H+GID+     N  KS+ ++  D   G   +V I YD  TK+L   + Y       ++   + L   +P  V VGFTA+TG      E++ +L W+F +     ++ E  NLA
Sbjct:   67 LGRAFYSAPIQIWDNTTGAVAASPTSFTFNID-VPNNSGPADGLAFVLLPVGSQPKDKGGLLGLFNNYKYDSNAHTVAVEFDTLYNVHW-DPKPRHIGIDV-----NSIKSIKTTTWDFVKGENAEVLITYDSSTKLLVASLVYPSLKTSFIVSDTVDLKSVLPEWVIVGFTATTGITKGNVETNDILSWSFASKLSDGTTSEALNLA 267          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_SOYBN (Lectin OS=Glycine max GN=LE1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.067e-15
Identity = 62/204 (30.39%), Postives = 99/204 (48.53%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP----AMISTTFTIRISPY-PNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDF-SESHQVLDWTF-TTFPLPSSSLEEQNL 607
            +GR LYS P+  W     ++ S   +   + Y P+T   ADG+ F  A  DT P T                  AVE DT++N +  DP   H+GI++     N  +S+ ++  DL + +  +V I YD  T +L   + Y       ++   + L  ++P  V +GF+A+TG D   ESH VL W+F +  P  SS+++  +L
Sbjct:   80 LGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSW--DPPNPHIGINV-----NSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDL 276          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LECS_VATMA (Seed lectin OS=Vatairea macrocarpa PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-15
Identity = 61/198 (30.81%), Postives = 95/198 (47.98%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFT-TFPLPS 583
            +GR LY+ P+  W       A  +T+F+  +   P+ + +ADG+ F  A  DT P  +                 AVE DT+ N +  DP A H+GI++     N  +S+       ++G+   V+I Y+  TK L   + Y  N    ++   + L   +P  V VGF+A++G   D  E+H VLDW+FT T   PS
Sbjct:   47 LGRALYAAPIHIWDDSTDRVASFATSFSFVVEA-PDESKTADGIAFFLAPPDTQPQKDGGFLGLFNDSNKSIQTVAVEFDTFSNTW--DPSARHIGINV-----NSIESMKYVKWGWENGKVANVYISYEASTKTLTASLTYPSNATSYIVSANVDLKSALPEWVRVGFSATSGLSRDHVETHDVLDWSFTSTLQAPS 236          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC1_MEDTR (Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.103e-15
Identity = 60/193 (31.09%), Postives = 95/193 (49.22%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX-----AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            +GR LYS P+  W       A   T FT  I+  P +++ ADG+ F  A  DT P                        AVE+DT+ N +  DP  N H+GI++     N  KS+ ++   L++GR   V + +D  T +L V ++Y G P   ++   + L + +P  V +GF+A+TG +F+E H +  W+F
Sbjct:   72 IGRALYSAPIHIWDSKTGDVANFETLFTFAITA-PYSSNVADGLAFFIAPVDTQPQNIGRAGFLGVFNSETYNKSIQTVAVEIDTFHNTW--DPKINRHIGINV-----NCIKSISTTSWVLENGREANVLVRFDAHTNVLSVVLSYPGLPDSYILSDVVPLKDIVPEWVRIGFSAATGAEFAE-HDIRYWSF 255          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: PHAM_PHAVU (Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=PDLEC2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 62/206 (30.10%), Postives = 88/206 (42.72%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX--AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTTFPLPSSSLEEQNLA 610
            +GR  YS P+  W       A   T FT  I   PN    ADG+ F      S P +                  AVE DT  N  W DP   H+GID+     N  KS+ ++  D  +G   +VHI Y+  TK+L   + Y        +   + L   +P  V VGF+A+TG      E++ +L W+F +     ++ E  NLA
Sbjct:   67 LGRAFYSAPIQIWDYTTGNVASFDTNFTFNIL-VPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPRERHIGIDV-----NSIKSIKTTPWDFVNGENAEVHITYESSTKLLVASLVYPSLKTSFTVSDTVDLKSVLPEWVSVGFSATTGITKGNVETNDILSWSFASKLSDGTTSEGLNLA 265          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: PHAL_PHAVU (Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=DLEC2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 61/206 (29.61%), Postives = 90/206 (43.69%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX--AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFS--ESHQVLDWTFTTFPLPSSSLEEQNLA 610
            +GR  YS P+  W       A  +T+FT  I   PN    ADG+ F      S P +                  AVE DT  N  W DP   H+GID+     N  +S+ ++  D  +G   +V I YD  T +L   + Y       ++   + L   +P  V VGF+A+TG +    E++ VL W+F +     ++ E  NLA
Sbjct:   66 LGRAFYSAPIQIWDNTTGTVASFATSFTFNIQ-VPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPTERHIGIDV-----NSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASKLSDGTTSEGLNLA 264          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_VICFA (Favin OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A  +TTF   I   PN  + ADG TF  A  DT P T                    AVE DT+ N  W   +   H+GID+     N  KS+ +   +L++G    V I ++  T +L V + Y  N     +   + L + +P  V +GF+A+TG +++ +H+VL WTF
Sbjct:   42 VGRALYSLPIHIWDSETGNVADFTTTFIFVIDA-PNGYNVADGFTFFIAPVDTKPQTGGGYLGVFNGKDYDKTAQTVAVEFDTFYNAAWDPSNGKRHIGIDV-----NTIKSISTKSWNLQNGEEAHVAISFNATTNVLSVTLLYP-NLTGYTLSEVVPLKDVVPEWVRIGFSATTGAEYA-THEVLSWTF 224          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC5_DOLBI (Lectin DB58 OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 59/204 (28.92%), Postives = 94/204 (46.08%), Query Frame = 2
Query:   23 VGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTTFPLPSSSLEE 598
            +GR  YS P+      T   A  +T+FT  I   PN + SADG+ F      S P                  A    VE DT+ N  W DP + H+GID+     N  KS+ ++   L +G+  ++ I Y+  T +L   + +       ++   + ++  +P  V +GF+A+TG    ++E+H VL W+F +  LP  S  E
Sbjct:   67 LGRAFYSSPIQIYDKSTGAVASWATSFTANIFA-PNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDV-----NSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFAS-KLPDDSTTE 262          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC1_DOLBI (Seed lectin subunit I OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15
Identity = 60/204 (29.41%), Postives = 92/204 (45.10%), Query Frame = 2
Query:   23 VGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTTFPLPSSSLEE 598
            +GR  YS P+      T   A  +T+FT++IS  P+    ADG+ F      S P                  A    VE DT+ N  W DP   H+GID+     N  KS+ +   DL +G   ++ I Y+  T +L   + +       ++   + ++  +P  V VGF+A+TG    + E+H VL W+F +  LP  S  E
Sbjct:   67 LGRAFYSSPIQIYDKSTGAVASWATSFTVKISA-PSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTFSNSGW-DPSMKHIGIDV-----NSIKSIATVSWDLANGENAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFAS-KLPDDSTAE 262          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC2_MEDTR (Truncated lectin 2 OS=Medicago truncatula GN=LEC2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.913e-15
Identity = 64/207 (30.92%), Postives = 95/207 (45.89%), Query Frame = 2
Query:    2 SAEAAKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPT-----EXXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDAN------HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQK--LIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            S      +GR LYS P+  W       A   TTFT  I+  PNT + ADG+ F  A  DT P +                      AVE+DT+ N  W     N      H+GID+     N  KS+ +    L++ +   V I ++G T +L V V Y   PL +   +   + L + +P  V +GF++STG ++S +H +L W+F
Sbjct:   61 SKAVKNSIGRALYSAPIHIWDSKTGSVANFQTTFTFTITA-PNTYNVADGLAFFIAPIDTKPKSIHHGGYLGVFDSKTYKKSIQTVAVEIDTFYNAQWDPNPGNISSTGRHIGIDV-----NSIKSISTVPWSLENNKKANVAIGFNGATNVLSVDVEY---PLIRHYTLSHVVPLKDVVPEWVRIGFSSSTGAEYS-AHDILSWSF 257          
The following BLAST results are available for this feature:
BLAST of CX295734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
PHAE_PHAVU6.252e-1630.77Erythroagglutinating phytohemagglutinin OS=Phaseol... [more]
LEC_SOYBN1.067e-1530.39Lectin OS=Glycine max GN=LE1 PE=1 SV=1[more]
LECS_VATMA2.376e-1530.81Seed lectin OS=Vatairea macrocarpa PE=1 SV=1[more]
LEC1_MEDTR3.103e-1531.09Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1[more]
PHAM_PHAVU4.053e-1530.10Leucoagglutinating phytohemagglutinin OS=Phaseolus... [more]
PHAL_PHAVU5.293e-1529.61Leucoagglutinating phytohemagglutinin OS=Phaseolus... [more]
LEC_VICFA5.293e-1532.46Favin OS=Vicia faba PE=1 SV=1[more]
LEC5_DOLBI5.293e-1528.92Lectin DB58 OS=Dolichos biflorus PE=1 SV=2[more]
LEC1_DOLBI5.293e-1529.41Seed lectin subunit I OS=Dolichos biflorus PE=1 SV... [more]
LEC2_MEDTR6.913e-1530.92Truncated lectin 2 OS=Medicago truncatula GN=LEC2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05075C12SK DroRLeaf1 Citrus clementina cDNA clone C05075C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295734 ID=CX295734; Name=CX295734; organism=Citrus clementina; type=EST; length=790bp
TTCGGCCGAGGCCGCTAAAAAGGTTGGACGGGTTTTATACAGCCAGCCTG
TGACTGCATGGCCAGCTATGATTAGTACCACCTTCACCATTAGGATCTCA
CCCTACCCAAATACAACGGATTCTGCAGATGGCATGACGTTTGTTTTTGC
AACCGATACCAGCCCTCCAACTGAAAACTCCGCCGGCGGAAATCTTGGAC
TGAGTAACGGTGTTTCGCAATTAGCCGTGGAGCTGGACACTTACAAGAAC
GACTACTGGTCTGATCCAGATGCTAACCATATGGGCATTGACATAGCAAA
CTTAACATCGAATCCAGCCAAGAGTCTCGACAGCTCTGGTATTGATCTCA
AAAGTGGAAGACCGATCCAGGTTCACATTTATTACGATGGATGGACGAAA
ATACTCTATGTTTATGTGGCATATGCGGGGAACCCACTTCAGAAGCTTAT
TGAAAGACCTATCCTCTTGTCAGAAACAATTCCAAGCTCAGTCTATGTTG
GCTTCACAGCATCCACAGGGCCCGACTTTTCAGAAAGCCATCAGGTGCTT
GATTGGACCTTCACAACGTTCCCATTGCCTTCTTCTTCTCTGGAGGAGCA
AAACCTGGCGATGCCAATATAATTCTAAACCGTCCTTGAAAAACCATGTC
ACATAAAAAATTATAATAAATAAAAATAACTAATATCGTCAATAAAGTGA
CATGGCTCTAGAAGCTGACTAAGATTAATATTGTTGGCTTGCTATCTGAG
ATGTTCTGCATGTACTTGTGTAGAAATGTCATATTCAGCT
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