CX295759

Overview
NameCX295759
Unique NameCX295759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 417.927 bits (1073), Expect = 2.812e-116
Identity = 202/238 (84.87%), Postives = 220/238 (92.44%), Query Frame = 1
Query:    1 VQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQL-ITIPDSE 711
            VQYLN+FGVAIGYTIAS+ISMMAI+RSNCFH  G K+PCHMNSNPYMIAFG+V+I+ SQIPDFDQLWWLSI+AAVMSFTYS+ GL LGIA+V   GK +GSLTGISIG V+ETQKIWR+FQALGDIAFAYSYSIILIEIQDTVKSPPSE KTMKKA+L+SV VTT+FYMLCGC GYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHL+GAYQV+CQPLFAFIEKQ  I  PDSE
Sbjct:  120 VQYLNIFGVAIGYTIASAISMMAIKRSNCFHKSGGKDPCHMNSNPYMIAFGLVQILFSQIPDFDQLWWLSILAAVMSFTYSSAGLALGIAQVVVNGKVKGSLTGISIGAVTETQKIWRTFQALGDIAFAYSYSIILIEIQDTVKSPPSEEKTMKKATLVSVSVTTMFYMLCGCMGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSE 357          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 6.708e-110
Identity = 186/238 (78.15%), Postives = 216/238 (90.76%), Query Frame = 1
Query:    1 VQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQLI-TIPDSE 711
            +QYLNLFG+AIGYTIA+SISMMAI+RSNCFH  G K+PCHM+SNPYMI FG+ EI+LSQ+PDFDQ+WW+SIVAAVMSFTYS IGL LGI +VA  G F+GSLTGISIGTV++TQKIWR+FQALGDIAFAYSYS++LIEIQDTV+SPP+ESKTMKKA+ IS+ VTT+FYMLCG  GYAAFGD +PGNLLTGFGFYNP+WLLDIANAAIV+HLVGAYQVF QP+FAFIEK +    PD++
Sbjct:  136 IQYLNLFGIAIGYTIAASISMMAIKRSNCFHKSGGKDPCHMSSNPYMIVFGVAEILLSQVPDFDQIWWISIVAAVMSFTYSAIGLALGIVQVAANGVFKGSLTGISIGTVTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKKATKISIAVTTIFYMLCGSMGYAAFGDAAPGNLLTGFGFYNPFWLLDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDND 373          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.818e-108
Identity = 185/238 (77.73%), Postives = 211/238 (88.66%), Query Frame = 1
Query:    1 VQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQLIT-IPDSE 711
            +QYLNLFG+ +GYTIA+SISMMAI+RSNCFH  G KNPCHM+SNPYMI FG+ EI+LSQI DFDQ+WWLSIVAA+MSFTYS IGL LGI +VA  G  +GSLTGISIG V++TQKIWR+FQALGDIAFAYSYS++LIEIQDTV+SPP+ESKTMK A+ IS+ VTT FYMLCGC GYAAFGD +PGNLLTGFGFYNP+WLLD+ANAAIVIHLVGAYQVF QP+FAFIEKQ     PDS+
Sbjct:  109 IQYLNLFGITVGYTIAASISMMAIKRSNCFHESGGKNPCHMSSNPYMIMFGVTEILLSQIKDFDQIWWLSIVAAIMSFTYSAIGLALGIIQVAANGVVKGSLTGISIGAVTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKIATRISIAVTTTFYMLCGCMGYAAFGDKAPGNLLTGFGFYNPFWLLDVANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSD 346          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.986e-97
Identity = 171/244 (70.08%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    1 VQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVS------ETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQLI-TIPDSE 711
            VQY+NLFG AIGYTIAS+IS++AI+R++C    G  +PCH+N N YMIAFGIV+I+ SQIPDFDQLWWLSIVAAVMSF YS IGLGLG++KV E  + +GSLTG+++GTV+       +QKIWR+FQ+LG+IAFAYSYS+ILIEIQDTVKSPP+E  TM+KA+ +SV VTT+FYMLCGC GYAAFGD +PGNLL   GF NPYWLLDIAN AIVIHLVGAYQV+CQPLFAF+EK+     P+SE
Sbjct:  118 VQYVNLFGTAIGYTIASAISLVAIQRTSCQQMNGPNDPCHVNGNVYMIAFGIVQIIFSQIPDFDQLWWLSIVAAVMSFAYSAIGLGLGVSKVVENKEIKGSLTGVTVGTVTLSGTVTSSQKIWRTFQSLGNIAFAYSYSMILIEIQDTVKSPPAEVNTMRKATFVSVAVTTVFYMLCGCVGYAAFGDNAPGNLLAHGGFRNPYWLLDIANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESE 361          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.192e-82
Identity = 145/231 (62.77%), Postives = 184/231 (79.65%), Query Frame = 1
Query:    4 QYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKF-RGSLTGISIGT-VSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKS-PPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQ 687
            QY NL G+ IGYTI +SISM+A++RSNCFH  G    C  ++ P+MI F I++I+LSQIP+F  L WLSI+AAVMSF Y++IG+GL IAK A  G+  R +LTG+++G  VS  +KIWR+FQA+GDIAFAY+YS +LIEIQDT+K+ PPSE+K MK+ASL+ V  TT FYMLCGC GYAAFG+ +PGN LTGFGFY P+WL+D AN  I +HL+GAYQVFCQP+F F+E Q
Sbjct:  124 QYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQIPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVRTTLTGVTVGIDVSGAEKIWRTFQAIGDIAFAYAYSTVLIEIQDTLKAGPPSENKAMKRASLVGVSTTTFFYMLCGCVGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQ 354          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.234e-79
Identity = 137/229 (59.83%), Postives = 183/229 (79.91%), Query Frame = 1
Query:    4 QYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGT-VSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQ 687
            QY NL GV +GYTI +SIS++A+ +SNCFH KG    C +++ PYM  FGI++++LSQIP+F +L +LSI+AAVMSFTY+TIG+GL IA VA     + S+TG ++G  V+  QKIWRSFQA+GDIAFAY+Y+ +LIEIQDT++S P+E+K MK+ASL+ V  TT FY+LCGC GYAAFG+ +PG+ LT FGF+ P+WL+D ANA I +HL+GAYQVF QP+F F+EK+
Sbjct:  128 QYGNLIGVTVGYTITASISLVAVGKSNCFHDKGHTADCTISNYPYMAVFGIIQVILSQIPNFHKLSFLSIMAAVMSFTYATIGIGLAIATVAGGKVGKTSMTGTAVGVDVTAAQKIWRSFQAVGDIAFAYAYATVLIEIQDTLRSSPAENKAMKRASLVGVSTTTFFYILCGCIGYAAFGNNAPGDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEKK 356          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.771e-78
Identity = 135/228 (59.21%), Postives = 182/228 (79.82%), Query Frame = 1
Query:    4 QYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGT-VSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEK 684
            QY+NL GV IGYTI +SIS++AI +SNC+H KG K  C +++ PYM AFGIV+I+LSQ+P+F +L +LSI+AAVMSF+Y++IG+GL IA VA     +  LTG  IG  V+ ++K+W+ FQA+GDIAF+Y+++ ILIEIQDT++S P E+K MK+ASL+ V  TT+FY+LCGC GYAAFG+ +PG+ LT FGFY PYWL+D ANA I +HL+GAYQV+ QP F F+E+
Sbjct:  119 QYVNLVGVTIGYTITASISLVAIGKSNCYHDKGHKAKCSVSNYPYMAAFGIVQIILSQLPNFHKLSFLSIIAAVMSFSYASIGIGLAIATVASGKIGKTELTGTVIGVDVTASEKVWKLFQAIGDIAFSYAFTTILIEIQDTLRSSPPENKVMKRASLVGVSTTTVFYILCGCIGYAAFGNQAPGDFLTDFGFYEPYWLIDFANACIALHLIGAYQVYAQPFFQFVEE 346          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.251e-72
Identity = 129/232 (55.60%), Postives = 168/232 (72.41%), Query Frame = 1
Query:    1 VQYLNLFGVAIGYTIASSISMMAIERSNCFHSKGDKNPCHM--NSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPSESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQL 690
            V Y++LFG  I YTI  +    AI +SNC+H  G    C    N+N +M+ FG+ +I +SQIP+F  + WLS+VAA+MSFTYS IG+GL + K+ E  K  GS+ GI      E  K+W  FQALG+IAF+Y +SIIL+EIQDT++SPP+E +TMKKAS ++V + T F+  CGCFGYAAFGD +PGNLLTGFGFY P+WL+D ANA IV+HLVG YQV+ QP+FA  E+ L
Sbjct:  117 VVYISLFGCGIAYTIVIATCSRAIMKSNCYHRNGHNATCSYGDNNNYFMVLFGLTQIFMSQIPNFHNMVWLSLVAAIMSFTYSFIGIGLALGKIIENRKIEGSIRGIPAENRGE--KVWIVFQALGNIAFSYPFSIILLEIQDTLRSPPAEKQTMKKASTVAVFIQTFFFFCCGCFGYAAFGDSTPGNLLTGFGFYEPFWLVDFANACIVLHLVGGYQVYSQPIFAAAERSL 346          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: LHTL5_ARATH (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana GN=At1g71680 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23
Identity = 64/194 (32.99%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  118 HMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPS--ESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQLI 693
            H+    Y++ F  +++VLSQ PDF+ +  +S++AA+MSF YS I     +A +A+  + R S  G+   TV+    ++ +F  +G IAFA++   +++EIQ T+ S P     K M K  +++  +  + Y+     GY AFG     ++L       P WL+  AN  + IH++G+YQVF   +F  IE  L+
Sbjct:  156 HIRQTYYILGFAALQLVLSQSPDFNSIKIVSLLAALMSFLYSMIA---SVASIAKGTEHRPSTYGVRGDTVA--SMVFDAFNGIGTIAFAFAGHSVVLEIQATIPSTPEVPSKKPMWKGVVVAYIIVIICYLFVAISGYWAFGAHVEDDVL--ISLERPAWLIAAANFMVFIHVIGSYQVFAMIVFDTIESYLV 342          
BLAST of CX295759 vs. ExPASy Swiss-Prot
Match: LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana GN=LHT2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.365e-22
Identity = 66/226 (29.20%), Postives = 109/226 (48.23%), Query Frame = 1
Query:   22 GVAIGYTIASSISMMAIERSNCFHSKGDKNPCHMNSNPYMIAFGIVEIVLSQIPDFDQLWWLSIVAAVMSFTYSTIGLGLGIAKVAETGKFRGSLTGISIGTVSETQKIWRSFQALGDIAFAYSYSIILIEIQDTVKSPPS--ESKTMKKASLISVGVTTLFYMLCGCFGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQLI 693
            GV I Y +    S+  + +  C   K       + +  +++ F  V  V+S +P+F+ +  +S+ AAVMS TYSTI     + K               +G      K++    ALGD+AFAY+   +++EIQ T+ S P       M +  +++  V  + Y      GY  FG+    N+L       P WL+ +AN  +VIH++G+YQ+F  P+F  +E  L+
Sbjct:  124 GVDIVYMVTGGASLKKVHQLVCPDCK------EIRTTFWIMIFASVHFVISHLPNFNSISIISLAAAVMSLTYSTIAWAASVHKGVHPDVDYSPRASTDVG------KVFNFLNALGDVAFAYAGHNVVLEIQATIPSTPEMPSKVPMWRGVIVAYIVVAICYFPVAFLGYYIFGNSVDDNIL--ITLEKPIWLIAMANMFVVIHVIGSYQIFAMPVFDMLETVLV 335          
The following BLAST results are available for this feature:
BLAST of CX295759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AAP3_ARATH2.812e-11684.87Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH6.708e-11078.15Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH2.818e-10877.73Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH4.986e-9770.08Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH1.192e-8262.77Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH1.234e-7959.83Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH6.771e-7859.21Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH4.251e-7255.60Probable amino acid permease 7 OS=Arabidopsis thal... [more]
LHTL5_ARATH6.224e-2332.99Lysine histidine transporter-like 5 OS=Arabidopsis... [more]
LHT2_ARATH2.365e-2229.20Lysine histidine transporter 2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075F02SK DroRLeaf1 Citrus clementina cDNA clone C05075F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295759 ID=CX295759; Name=CX295759; organism=Citrus clementina; type=EST; length=742bp
GTTCAGTATCTGAACCTTTTCGGAGTTGCCATTGGTTACACTATAGCTTC
ATCCATAAGCATGATGGCTATAGAAAGGTCAAATTGCTTTCACTCTAAAG
GAGATAAGAATCCGTGCCATATGAATAGCAATCCATACATGATTGCTTTT
GGCATTGTGGAAATTGTTCTCTCTCAAATACCTGACTTTGATCAGCTATG
GTGGCTCTCAATTGTTGCCGCTGTCATGTCCTTTACTTACTCTACTATTG
GTCTTGGCCTTGGTATTGCTAAAGTTGCAGAAACCGGCAAATTCAGGGGA
AGCTTAACTGGTATTAGTATTGGCACTGTTAGTGAAACTCAAAAGATATG
GAGAAGCTTCCAAGCACTTGGAGACATAGCATTTGCTTATTCTTACTCCA
TCATCCTCATTGAAATTCAGGACACGGTTAAATCTCCACCATCAGAATCA
AAGACAATGAAGAAGGCTTCACTAATAAGTGTTGGAGTCACAACTCTTTT
TTACATGCTCTGTGGCTGCTTTGGCTATGCGGCTTTTGGGGACTTGTCGC
CCGGAAATTTGCTCACTGGTTTTGGCTTTTATAACCCATATTGGCTACTT
GACATAGCCAATGCAGCCATTGTCATCCACCTTGTTGGTGCATACCAAGT
TTTCTGCCAACCCCTCTTTGCATTCATTGAAAAACAGCTCATCACGATTC
CGGATAGCGAATCATCACAAGGATATTAAGTCCCATCCTGGA
back to top