CX295774

Overview
NameCX295774
Unique NameCX295774
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295774_ssr87 microsatellite CX295774_ssr87:87..98. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig11659 contig Ccv1_Contig11659:14..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.556e-58
Identity = 115/164 (70.12%), Postives = 126/164 (76.83%), Query Frame = 2
Query:  203 PQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            P K PKRN YA   AILASMTSILLGYDIGVMSGA +YIK D K++D +I IL G LNI+SLIGS AAGRTSDWIGRRYTIV                 NYAFLM GRF+AG+GVGYA +IAPVYTAE+SPAS+RGFL SFPEVFIN GI+LGYVSN  FSN P
Sbjct:   26 PAKPPKRNNYAFACAILASMTSILLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLP 189          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.022e-57
Identity = 112/179 (62.57%), Postives = 138/179 (77.09%), Query Frame = 2
Query:  158 NNTDPQNQKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            N++  +    +A+ +P +   R+ YA   AILASMTSI+LGYDIGVMSGA+++IKDD K+SD ++EIL+GILNI+SL+GS AAGRTSDW+GRRYTIV                TNY F+M GRFVAG+GVGYA +IAPVYTAE++PAS+RGFLTSFPE+FIN GILLGYVSNY FS  P
Sbjct:    2 NSSGVEQGVVIAESEPPRG-NRSRYAFACAILASMTSIILGYDIGVMSGASIFIKDDLKLSDVQLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLP 179          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.581e-55
Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 2
Query:  188 LADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            +A+ +P +   R+ +A   AILASMTSI+LGYDIGVMSGAA++IKDD K+SD ++EIL+GILNI+SLIGS AAGRTSDWIGRRYTIV                TNY F+M GRFVAG+GVGYA +IAPVYT E++PAS+RGFL+SFPE+FIN GILLGYVSNY F+  P
Sbjct:   12 VAESEPPRG-NRSRFAFACAILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLP 179          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.788e-44
Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = 2
Query:  215 PKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGF 682
            P  N +A G AI+AS+ SI+ GYD GVMSGA ++I+DD K++DT+IE+L GILN+ +L+GSL AG+TSD IGRRYTI                  NY  LM GR +AGVGVG+A +IAPVY+AE+S AS RGFLTS PE+ I+ GILLGYVSNY F
Sbjct:   16 PHMNKFAFGCAIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCF 171          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 2
Query:  230 YASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFS 685
            Y    A  AS+ ++LLGYD+GVMSGA L+I+ D K+++ + E+LIG L+I SL GSLA GRTSD IGR++T+                  ++  LM GR +AG+G+G   +IAPVY AE+SP   RGF TSFPE+FIN GILLGYVSNY FS
Sbjct:   54 YVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFS 205          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39
Identity = 86/170 (50.59%), Postives = 113/170 (66.47%), Query Frame = 2
Query:  188 LADFDPQKKPKR-NLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            +AD    +KP   N +A   AI+AS+ SI+ GYD GVMSGA ++I++D K +D +IE+L GILN+ +L+GSL AGRTSD IGRRYTIV                 NY  L+ GR  AG+GVG+A ++APVY+AE++ AS RG L S P + I+ GILLGY+ NY FS  P
Sbjct:    1 MADQISGEKPAGVNRFALQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLP 170          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.094e-21
Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  224 NLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKV---SDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            N Y  G  + A +  +L GYD GV+SGA LYIKDDF+V   S    E ++ +  + ++IG+ A G  +D+ GR+   +                 +   L+ GR + G+GVG A++ APVY AE SP+  RG L S   + I GG  L Y+ N  F+  P
Sbjct:   28 NSYILGLTVTAGIGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLVNSAFTQVP 187          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 56/173 (32.37%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  179 QKTLADFDPQKKPKRN---LYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSN 688
            Q+  +D  PQ  P++     +   ++++A+++ +L+GY++G++SGA L ++   +++  + EI++  L I +L+ SL  G   D  GRR TI+                 +Y  L+ GR   GV +  +A+   VY AELSP   RG L S  E+ I  GILL Y+ NY F++
Sbjct:   13 QQRSSDDHPQTNPRQTGCGAFIILSSVIAAISGLLVGYELGIISGALLQLQSLLELTCQQQEIVVSALLIGALVASLVGGCLIDLYGRRTTIIFTSILLVFANLLPVVVVSYGSLIAGRIFIGVSISLSAIATCVYIAELSPQDKRGMLVSLNELMIVAGILLAYICNYLFAS 185          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19
Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 2
Query:  221 RNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKI---EILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSN 688
            +N Y    A  A +  +L GYD GV+SGA LYI+DDFK  D      E+++ +    +++G+   G  +D +GRR  I+                 N + L+ GR   G+GVG A++ AP+Y +E SPA  RG L S     I GG  L Y+ N  F++
Sbjct:   24 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTD 182          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = 2
Query:  158 NNTDPQ-NQKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFK--VSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSN 688
            N TDPQ N+    + +  +  K + +    + +A ++ +L GYD GV+SGA   +  D    +S  + E++    +  +LI +  +G  +DW+GR+  ++                 N A ++ GRF+ G G+G  +LI P+Y  EL+PA  RG L     VFI GG L+ Y  N  F +
Sbjct:   55 NATDPQANEVADENGEGFEAEKISSWIWVLSAVAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLIAYSLNAAFEH 234          
The following BLAST results are available for this feature:
BLAST of CX295774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PLT5_ARATH5.556e-5870.12Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT1_ARATH8.022e-5762.57Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT2_ARATH2.581e-5565.09Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT3_ARATH7.788e-4458.33Probable polyol transporter 3 OS=Arabidopsis thali... [more]
PLT4_ARATH1.985e-3952.63Probable polyol transporter 4 OS=Arabidopsis thali... [more]
PLT6_ARATH5.776e-3950.59Probable polyol transporter 6 OS=Arabidopsis thali... [more]
INT1_ARATH7.094e-2136.25Probable inositol transporter 1 OS=Arabidopsis tha... [more]
GTR12_XENLA2.064e-2032.37Solute carrier family 2, facilitated glucose trans... [more]
INT2_ARATH1.747e-1935.22Probable inositol transporter 2 OS=Arabidopsis tha... [more]
ITR2_SCHPO1.252e-1730.56Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC05075G05SK DroRLeaf1 Citrus clementina cDNA clone C05075G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295774 ID=CX295774; Name=CX295774; organism=Citrus clementina; type=EST; length=716bp
GGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTTTCTATCTCTT
CTTCCAACCCTAGCTTATATAATTAAACACTCGCAGTCTCTCTCTCTCGC
TCTCTGGCTAGCTAGCTTAGCAACAACATGGCTGCAGGCTTGGGAGCCAA
GAGCAACAACAATACTGACCCTCAAAACCAAAAAACTCTTGCGGATTTTG
ATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTCCGGCGCTGCCATT
TTGGCTTCCATGACTTCAATCTTACTAGGTTATGACATTGGAGTAATGAG
TGGAGCTGCACTCTACATCAAAGACGACTTTAAAGTCAGTGACACAAAAA
TCGAGATCTTAATTGGAATCTTGAATATTTTCTCACTCATCGGCTCACTG
GCCGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGTACACTATCGTGTT
AGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATGGGGTTTGCCACAA
ACTATGCTTTCCTCATGGGGGGTCGCTTCGTCGCCGGCGTCGGCGTCGGA
TACGCTGCATTGATCGCTCCCGTATACACAGCTGAACTCTCTCCGGCTTC
CACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTCATTAACGGCGGGA
TATTACTTGGCTACGTCTCGAACTACGGATTCTCCAACTACCCCTCACTT
AGGCTGGCGCATGATG
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