CX295780

Overview
NameCX295780
Unique NameCX295780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10423 contig Ccv1_Contig10423:71..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: AASS_ARATH (Alpha-aminoadipic semialdehyde synthase OS=Arabidopsis thaliana GN=LKR/SDH PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.208e-57
Identity = 114/184 (61.96%), Postives = 140/184 (76.09%), Query Frame = 3
Query:   21 GSGPTFRMFLCEILKMDSQKMGEAPLGEKEITERILSLGHCKERETASKAAKTIIFLGLHEQTEIPASCESPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPALDMLQAYGIKLVEKS 572
            G   TF   L  IL  D+    E   GE+EI++RI+ LGH KE  TA+KAAKTI+FLG +E+ E+P+ C+S F  TC LMEEKLAYS  E+DMVLLHHEVEVEF + +  E H ATLLEFG +KNG+  +AMA TVGIPA I A+LL+ +KIKTRGVLRP+E EVY+PALD+LQAYGIKL+EK+
Sbjct:  882 GKRITFGALLSNILNKDADNESEPLAGEEEISKRIIKLGHSKE--TAAKAAKTIVFLGFNEEREVPSLCKSVFDATCYLMEEKLAYSGNEQDMVLLHHEVEVEFLESKRIEKHTATLLEFGDIKNGQTTTAMAKTVGIPAAIGALLLIEDKIKTRGVLRPLEAEVYLPALDILQAYGIKLMEKA 1063          
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: SCPDH_DICDI (Probable saccharopine dehydrogenase [NADP+, L-glutamate-forming] OS=Dictyostelium discoideum GN=sdh PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 48/127 (37.80%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  186 FLGLHEQTEIPASCESPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPALDMLQAYGIKLVE 566
            +LGL    E   +  +P    C L+E+KL+Y + E D+V+L H   V++ D   +E   ++L+ +G + NG   SA +LTVG+P GIA  L+   K  TRGV+ P+ PE Y+P L+ L++  I+++E
Sbjct:  352 WLGLLSADEKVVNKNTPIDSLCALLEKKLSYKAGERDVVVLEHNFVVQYADR--TEKEVSSLICYG-IPNGS--SATSLTVGVPVGIATELIADGKTTTRGVVGPVTPEFYLPILEKLKSENIEMIE 473          
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: LYS9_YEAST (Saccharopine dehydrogenase [NADP+, L-glutamate-forming] OS=Saccharomyces cerevisiae GN=LYS9 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14
Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = 3
Query:   75 QKMGEAPLGEKEITERILSLGHCKERETASKAAKTIIFLGLHEQTEIPASCESPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPAL-DMLQAYGIKLVEKS 572
            Q +G     ++++   I S    K+ E   +      +LGL    +I     +     C  +EE + Y   E DMV+L H+  +E+ DG  +E   +TL+++GK+      S+MA TVG P  IA   +L   IK  G+L P  PE+  P + ++   YGI L EK+
Sbjct:  283 QYLGAKSTSKEDLIASIDSKATWKDDEDRERILSGFAWLGLFSDAKITPRGNA-LDTLCARLEELMQYEDNERDMVVLQHKFGIEWADGT-TETRTSTLVDYGKVGG---YSSMAATVGYPVAIATKFVLDGTIKGPGLLAPYSPEINDPIMKELKDKYGIYLKEKT 444          
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: LYS9_MAGGR (Saccharopine dehydrogenase [NADP+, L-glutamate-forming] OS=Magnaporthe grisea GN=LYS3 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14
Identity = 55/197 (27.92%), Postives = 87/197 (44.16%), Query Frame = 3
Query:   30 PTFRMFLCEI--LKMDSQKMGEAPLGEKEITERILSLGHCKERETASKAAKTIIFLGLHEQTEIPASCE--------------SPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPAL-DMLQAYGIKLVEK 569
            P F   L +I  L  + Q   +  +  KE T++I+      E++  S       F    EQ  I A  +              +     C  +EEK+ +   E D+V+L H+ E+E  DG   E   ++L E+G        SAMA  VG+P  +A   +L   I  RGVL P+  ++  P + ++ + YGI+  EK
Sbjct:  252 PQFIKVLVDIGFLSDEEQPFLKEAIPWKEATQKIVKASSASEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKITPRGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGS-RETRTSSLCEYGAPIGSGGYSAMAKLVGVPCAVAVKFVLDGTISDRGVLAPMNSKINDPLMKELKEKYGIECKEK 447          
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: LYS9_SCHPO (Saccharopine dehydrogenase [NADP+, L-glutamate-forming] OS=Schizosaccharomyces pombe GN=lys9 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.667e-13
Identity = 47/156 (30.13%), Postives = 82/156 (52.56%), Query Frame = 3
Query:  102 EKEITERILSLGHCKERETASKAAKTIIFLGLHEQTEIPASCESPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPALDMLQAYGIKLVEK 569
            E ++ ++I S+   K+ +   +    + +LG+     +     +P    C  +EE + Y   E DM++L H+ EVE  +G+  +    TLL++G + NG   ++MA  VG+P G+A   +L   I T GVL P + ++  P +D L   GI+L E+
Sbjct:  295 EADLIKKISSIHKFKDEDDKKRILNGLKWLGMFSSKPVTPR-GNPLDTLCATLEELMQYEEGERDMLILQHKFEVETKEGK-RQTRTCTLLDYG-VPNG--YTSMAKLVGVPCGVATQQILDGVINTPGVLAPNDMKLCGPLIDTLAKEGIRLEEE 445          
BLAST of CX295780 vs. ExPASy Swiss-Prot
Match: AASS_RAT (Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Rattus norvegicus GN=Aass PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  186 FLGLHEQTEIPASCESPFSVTCLLMEEKLAYSSTEEDMVLLHHEVEVEFPDGQPSENHRATLLEFGKMKNGKMISAMALTVGIPAGIAAMLLLVNKIKTRGVLRPIEPEVYVPALDMLQAYGI 554
            +LGL    ++P + ES        +  KL+Y   E+DM+++     +  P G   EN    L+ +G   NG   SAMA TVG+P  +AA +LL  +I+T+G++ P   E+Y P L+ ++A GI
Sbjct:  799 WLGLLGDEQVPQA-ESIVDAFSKHLVSKLSYGPEEKDMIVMRDSFGIRHPSGH-LENKTIDLVVYGDF-NG--FSAMAKTVGLPTAMAAKMLLDGEIETKGLMGPFSKEIYGPILERIKAEGI 916          
The following BLAST results are available for this feature:
BLAST of CX295780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AASS_ARATH3.208e-5761.96Alpha-aminoadipic semialdehyde synthase OS=Arabido... [more]
SCPDH_DICDI4.686e-1637.80Probable saccharopine dehydrogenase [NADP+, L-glut... [more]
LYS9_YEAST5.729e-1431.14Saccharopine dehydrogenase [NADP+, L-glutamate-for... [more]
LYS9_MAGGR7.482e-1427.92Saccharopine dehydrogenase [NADP+, L-glutamate-for... [more]
LYS9_SCHPO1.667e-1330.13Saccharopine dehydrogenase [NADP+, L-glutamate-for... [more]
AASS_RAT5.928e-1134.96Alpha-aminoadipic semialdehyde synthase, mitochond... [more]
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Properties
Property NameValue
Genbank descriptionC05075G11SK DroRLeaf1 Citrus clementina cDNA clone C05075G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295780 ID=CX295780; Name=CX295780; organism=Citrus clementina; type=EST; length=671bp
ACGAGGCCAGTTCTTAACAAGGATCCGGGCCCACATTCAGAATGTTCCTA
TGTGAAATTCTCAAAATGGACAGTCAGAAAATGGGTGAAGCTCCATTAGG
AGAAAAGGAGATAACTGAAAGGATTCTCTCACTTGGACATTGCAAAGAAA
GAGAAACAGCATCAAAGGCAGCCAAAACTATAATATTTTTGGGGCTTCAT
GAGCAGACAGAAATTCCTGCTTCCTGTGAGAGTCCGTTTTCTGTTACCTG
TCTCCTTATGGAAGAAAAGCTAGCCTACTCGAGCACTGAGGAGGATATGG
TGCTTTTACATCATGAAGTGGAAGTAGAATTCCCAGATGGGCAACCGTCA
GAGAACCATAGGGCCACTTTATTGGAATTTGGAAAGATGAAGAATGGGAA
AATGATTAGTGCAATGGCTCTAACAGTTGGTATTCCTGCAGGCATAGCAG
CCATGCTCTTACTCGTAAACAAGATCAAAACAAGAGGCGTCCTGAGACCT
ATCGAACCTGAAGTATATGTGCCAGCATTGGATATGTTGCAAGCCTATGG
TATCAAGTTGGTGGAAAAGAGTGGGTGACCCTAAAACTATTTAGTATCTC
CCTGAATTCTTTTTCCTGTACAGATTCAGGCATCAAGCTTGAGAATTCAA
AACCAGAATAAGATAATGACA
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