CX295797

Overview
NameCX295797
Unique NameCX295797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10877 contig Ccv1_Contig10877:13..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.135e-73
Identity = 153/210 (72.86%), Postives = 167/210 (79.52%), Query Frame = 2
Query:  107 MISSVKHTPFSASTDFLPKKRFLTPT-LKFSPLPIIQN----SIFNNKFSSEKPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA 721
            M+SS+K +  S ST      R   PT LKFSPL II+N    S   N  S +KPLHISS  N        ++E+K +  AYEADRSRPLDINIE+ DEQ+    AQ+LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA+APKTDLEFWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRSIPTKLKFSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF-------KREVKVE--AYEADRSRPLDINIELPDEQS----AQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA 197          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.138e-58
Identity = 113/158 (71.52%), Postives = 126/158 (79.75%), Query Frame = 2
Query:  248 KPLHISSTQNLTFSPKEQQKELKTQCNAYEADRSRPLDINIEVLDEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA 721
            KPLH+SS+         + K    +C AYEADRS P  I  +    + + EAA++LKIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLA GSLMML+SWA  I E PKTD +FWK+LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA
Sbjct:   48 KPLHLSSSL--------RAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPA 197          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 51/108 (47.22%), Postives = 65/108 (60.19%), Query Frame = 2
Query:  395 FEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            F     L  G +F TW+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP
Sbjct:   92 FSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEP 199          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP
Sbjct:  100 LVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEP 201          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21
Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP
Sbjct:  104 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEP 205          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L  GI    W+ LNV+FNI NKK+ N FPYP+  S + L  G +  LVSW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP
Sbjct:  103 LVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEP 204          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20
Identity = 49/113 (43.36%), Postives = 64/113 (56.64%), Query Frame = 2
Query:  380 DEQARFEAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            D +  F     L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  LVSW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP
Sbjct:   99 DAKVGFFNKATLTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEP 211          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.672e-20
Identity = 47/102 (46.08%), Postives = 60/102 (58.82%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP
Sbjct:  103 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEP 204          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L+SW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP
Sbjct:  106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEP 207          
BLAST of CX295797 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  413 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEP 718
            L++G+ FA W+  N+ FNIYNK+VL A   P   + +  A GS+++   WA  + + PK       ++ P+AV HT+G++   +S+ KV+VSFTH IK+ EP
Sbjct:  100 LELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEP 201          
The following BLAST results are available for this feature:
BLAST of CX295797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GPT2_ARATH2.135e-7372.86Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.138e-5871.52Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA2.241e-2247.22Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL7.208e-2148.04Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR9.414e-2148.04Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.229e-2048.04Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU3.577e-2043.36Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR4.672e-2046.08Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE6.102e-2045.10Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB5.711e-1840.20Triose phosphate/phosphate translocator, non-green... [more]
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Properties
Property NameValue
Genbank descriptionC05076A04SK DroRLeaf1 Citrus clementina cDNA clone C05076A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295797 ID=CX295797; Name=CX295797; organism=Citrus clementina; type=EST; length=722bp
CGCACATACACACGTATACAATTTCTCTTCTCTCCGGCTTCGGGTACAAA
ACTTGTCGAATTCGTTGAATTACCCCCCTACCATTCGCATTCTTCACAAA
AACACAATGATCTCTTCAGTTAAGCACACCCCATTTTCAGCATCCACAGA
TTTCTTGCCAAAGAAACGTTTTTTAACCCCAACGCTAAAGTTCTCTCCGC
TACCCATCATCCAAAATTCAATCTTTAACAACAAATTCTCTTCAGAAAAG
CCTCTTCATATTTCATCAACTCAAAATCTCACATTTTCGCCAAAAGAGCA
ACAAAAAGAGCTTAAAACACAGTGCAATGCCTATGAGGCTGACAGGTCAC
GTCCTCTGGACATAAACATCGAGGTTCTTGATGAGCAGGCTCGGTTTGAG
GCTGCCCAGAGGCTCAAAATTGGCATATATTTCGCCACATGGTGGGCTTT
GAATGTGGTGTTTAATATCTATAACAAAAAAGTGTTGAATGCTTTTCCTT
ATCCTTGGCTTACTTCTACTCTTTCACTGGCTTGTGGCTCTCTCATGATG
TTGGTTTCTTGGGCCACCAGAATCGCTGAAGCCCCTAAAACCGATCTTGA
GTTCTGGAAGAGTTTGTTTCCTGTTGCAGTGGCACATACAATTGGGCATG
TAGCAGCAACCGTAAGTATGTCAAAAGTTGCAGTTTCATTCACTCACATC
ATCAAGAGTGGTGAGCCTGCAT
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