CX295803

Overview
NameCX295803
Unique NameCX295803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_PEA (Primary amine oxidase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.718e-41
Identity = 73/125 (58.40%), Postives = 96/125 (76.80%), Query Frame = 2
Query:  260 HLIRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            H + WANW F++GFD R G +IS ASIYD+  HK RRVLY+G+ISELF+PYQDP+E +Y  T+FD+GEFGFGL+ V L    DCP +A F+D Y  S +GTP+   NA+C+FE++ G++MWRHTE
Sbjct:  261 HSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTE 384          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_LENCU (Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.269e-40
Identity = 73/123 (59.35%), Postives = 95/123 (77.24%), Query Frame = 2
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            + WANW F++GFD R G +IS ASIYD+  HK RRVLY+G+ISELF+PYQDP+E +Y  T+FD+GEFGFGL+ V L    DCP +A F+D Y  S DGTP+   NA+C+FE++ G++MWRHTE
Sbjct:  256 VSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYIHSADGTPIFLENAICVFEQY-GNIMWRHTE 377          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_ARATH (Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.828e-40
Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 2
Query:  260 HLIRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            HL++WANWVF+V  D R G IIS A++ D    + R V+Y+GF SELF+PY DP EGWY+  Y D GE G G TA+PL  LNDCP N+ ++DG FAS DG P+  PN +C+FER+AGD+ WRH+E
Sbjct:  290 HLVKWANWVFHVKADQRAGMIISQATVRDSETGEPRSVMYKGFPSELFVPYMDPEEGWYYKGYMDAGELGLGPTAMPLVPLNDCPRNSYYIDGVFASPDGKPIVQPNMICLFERYAGDISWRHSE 414          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_ECOLI (Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 49/124 (39.52%), Postives = 76/124 (61.29%), Query Frame = 2
Query:  263 LIRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            +I W NW F++  ++RVG +IST + Y+ N  K R+V+Y G +  + +PY DP  GWY   Y D+G++G G    P+ R  D P+NAV ++   A   G P++ P A+ +FER+AG   ++H E
Sbjct:  352 MIHWRNWDFHLSMNSRVGPMISTVT-YNDNGTK-RKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGP-EYKHQE 472          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_KLEAE (Primary amine oxidase OS=Klebsiella aerogenes GN=maoA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            I W NW F++  ++RVG I+ST + Y+ N  K R+V+Y G +  + +PY DP  GWY   Y D+G++G G    P+ R  D P+NAV +D   A   G P   P AV IFER+AG   ++H E
Sbjct:  353 IHWQNWDFHLRLNSRVGPILSTVT-YNDNGTK-RQVMYEGSLGGMIVPYGDPDVGWYFKAYLDSGDYGMGTLTSPIVRGKDAPSNAVLLDETIADYTGKPTTIPGAVAIFERYAGP-EYKHLE 472          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMOH_ARTGO (Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15
Identity = 47/125 (37.60%), Postives = 64/125 (51.20%), Query Frame = 2
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRR--VLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            + WA W   VGFDAR G ++        + HK RR  V++R  ISE+ +PY DPS       YFD+GE+  G  A  L    DC  +  +M    A   G P    N +CI E  AG ++W+HT+
Sbjct:  258 LSWAGWDLRVGFDAREGLVLHQLH----HSHKGRRRPVIHRASISEMVVPYGDPSPYRSWQNYFDSGEYLVGRDANSLRLGCDCLGDITYMSPVVADDFGNPRTIENGICIHEEDAG-ILWKHTD 377          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO1_ASPNG (Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 2
Query:  263 LIRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHT 631
            L+ W  W F V F+ R G     A+I+D+  +  R VLYR  +SE+ +PY DP   ++    FD G+ G G  A  L    DC     + D      DG+  K PNA+C+ E+  G + W+H+
Sbjct:  264 LVEWQKWRFRVAFNPREG-----ATIHDV-WYDGRSVLYRLSVSEMTVPYADPRPPFHRKQAFDFGDGGGGNMANNLSIGCDCLGVIKYFDAVMTGADGSAKKMPNAICLHEQDNG-IGWKHS 379          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO_PICAN (Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 38/125 (30.40%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  260 HLIRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            +++ W+N+ F++GF+ R G ++S  S  D      R + +R  +SE+ +PY  P          D GE+G G    PL    DC     ++D +F+ + G P+   NAVCI E   G ++++H++
Sbjct:  257 NVMEWSNFKFHIGFNYREGIVLSDVSYNDHG--NVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDG-LLFKHSD 378          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMOH2_SCHPO (Putative primary amine oxidase 2 OS=Schizosaccharomyces pombe GN=SPAC2E1P3.04 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 2
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTE 634
            I W N+  ++GF+ R G ++S  S Y+ N H  R + YR  I+E+ +PY +P         FD GE+G G    PL    DC     ++D +F +  G      NA+CI E   G V+++H++
Sbjct:  261 IEWQNFRMHIGFNYREGIVLSDIS-YNDNGH-IRPLFYRMSIAEMVVPYGNPEHPHQRKHAFDLGEYGAGYLTNPLALGCDCKGVIHYLDAHFVNNTGEVETVKNAICIHEEDDG-VLFKHSD 380          
BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO2_ARTS1 (Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 2
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRH 628
            + WA+W F VGF  R G ++      D  +   R V+ R  +SE+ +PY D +        FD+GE+  G  A  L    DC     + DG+     G P    NA+C+ E     ++W+H
Sbjct:  241 VTWADWSFRVGFTPREGLVLHQLKFKDQGVD--RPVINRASLSEMVVPYGDTAPVQAKKNAFDSGEYNIGNMANSLTLGCDCLGEIKYFDGHSVDSHGNPWTIENAICMHEED-DSILWKH 358          
The following BLAST results are available for this feature:
BLAST of CX295803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AMO_PEA9.718e-4158.40Primary amine oxidase OS=Pisum sativum PE=1 SV=1[more]
AMO_LENCU1.269e-4059.35Primary amine oxidase (Fragment) OS=Lens culinaris... [more]
AMO_ARATH2.828e-4056.80Primary amine oxidase OS=Arabidopsis thaliana GN=A... [more]
AMO_ECOLI7.736e-2239.52Primary amine oxidase OS=Escherichia coli (strain ... [more]
AMO_KLEAE1.010e-2142.28Primary amine oxidase OS=Klebsiella aerogenes GN=m... [more]
AMOH_ARTGO3.148e-1537.60Histamine oxidase OS=Arthrobacter globiformis PE=1... [more]
AMO1_ASPNG1.120e-1234.96Copper amine oxidase 1 OS=Aspergillus niger GN=AO-... [more]
AMO_PICAN2.494e-1230.40Peroxisomal primary amine oxidase OS=Pichia angust... [more]
AMOH2_SCHPO9.479e-1233.33Putative primary amine oxidase 2 OS=Schizosaccharo... [more]
AMO2_ARTS13.602e-1130.58Copper methylamine oxidase OS=Arthrobacter sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC05076A10SK DroRLeaf1 Citrus clementina cDNA clone C05076A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295803 ID=CX295803; Name=CX295803; organism=Citrus clementina; type=EST; length=683bp
TAATTAGTTGAAATATAAAAAATAAAATAAAAAAACTCCAAAAGTACCTA
AAAATTTCTTCCCGTTCCACTATCAATAGGTCGAGCGGCCACTCACCACT
AAATTAAATCATAATAAATATATTTAGTATCAGTGTGCTGACGGTTTAGT
GTGGATACATTTTTATCAGTCAATCACTATTATCGTTGTTGTTTTTTCTA
CGTGTTGTTTGAAGAGTTTAATTGCAAAGCAACAATTGAAACAAATTTAA
TGTCTCTGCCATTTAATCAGATGGGCCAACTGGGTGTTCAACGTTGGATT
TGATGCGCGAGTGGGTACAATAATTTCAACGGCTTCAATTTACGATATCA
ATATGCACAAATATCGACGAGTTCTGTACAGGGGATTCATATCAGAACTA
TTCATACCATACCAAGATCCAAGTGAGGGATGGTACCACATAACATATTT
TGATAATGGTGAATTTGGGTTCGGTCTAACAGCTGTGCCTTTAGAGCGCC
TCAACGATTGCCCCGCTAACGCTGTATTTATGGATGGTTATTTTGCCAGT
CAAGATGGCACACCAGTAAAAACGCCTAATGCCGTGTGCATCTTTGAACG
ACATGCCGGCGACGTCATGTGGCGTCACACTGAAGCAGAATGCCAGGACA
TGTAACTTTCCTTTTTTATATTTGGCCTCTTTT
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