CX295827

Overview
NameCX295827
Unique NameCX295827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.868e-107
Identity = 180/245 (73.47%), Postives = 207/245 (84.49%), Query Frame = 1
Query:    4 LVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPSGDP 738
            LVDGGCPPGLVLIDDGWQSI HD D ID EG+N T AGEQMPCRLL+++EN KF+DYVSP      ++ GM AF+RDLKDEF TVD +YVWHALCGYWGGLRP  P LP  +T+++P+LSPGL+LTMEDLAVDKI+  G+GF  P+L  + YEGLHSHL+  GIDGVKVDVIH+LE+LC+ YGGRVDLAKAY+KALT+SV KHF GNGVIASM   +DFM LGTEAI+LGRVGDDFWCTDPSGDP
Sbjct:  248 LVDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPK---DQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPP-STIIRPELSPGLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDP 488          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 3.297e-104
Identity = 176/247 (71.26%), Postives = 210/247 (85.02%), Query Frame = 1
Query:    4 LVDGGCPPGLVLIDDGWQSISHDED-PI-DSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPSGDP 738
            L DGGCPPG V+IDDGWQSISHD+D P+ + +G+NRT+AGEQMPCRL++Y+EN+KFR+Y     GD+   KG+  F+RDLK+EF++V+ VYVWHALCGYWGG+RP + G+PE   VV PKLSPG+++TMEDLAVDKIV NGVG VPP L  +M++G+HSHLE  GIDGVKVDVIHLLE+L E YGGRV+LAKAYYKALT+SV KHFKGNGVIASM   +DF LLGTEAI+LGRVGDDFWC DPSGDP
Sbjct:  259 LTDGGCPPGFVIIDDGWQSISHDDDDPVTERDGMNRTSAGEQMPCRLIKYEENYKFREY---ENGDNGGKKGLVGFVRDLKEEFRSVESVYVWHALCGYWGGVRPKVCGMPEAKVVV-PKLSPGVKMTMEDLAVDKIVENGVGLVPPNLAQEMFDGIHSHLESAGIDGVKVDVIHLLELLSEEYGGRVELAKAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDP 501          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.613e-101
Identity = 176/247 (71.26%), Postives = 201/247 (81.38%), Query Frame = 1
Query:    4 LVDGGCPPGLVLIDDGWQSISHDEDPIDS--EGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPSGDP 738
            L DGGCPPGLVLIDDGWQSI HD+D + S  EG+NRT+AGEQMPCRL+++QEN+KFR+Y            GMG F+R++K  F TV+QVYVWHALCGYWGGLRP  PGLP    VV P+LSPGL+ TMEDLAVDKIVNNGVG V P    ++YEGLHSHL+  GIDGVKVDVIHLLE++CE YGGRV+LAKAY+  LT SVR+HF GNGVIASM   +DFMLLGTEA+ALGRVGDDFWCTDPSGDP
Sbjct:  251 LADGGCPPGLVLIDDGWQSICHDDDDLGSGAEGMNRTSAGEQMPCRLIKFQENYKFREYKG----------GMGGFVREMKAAFPTVEQVYVWHALCGYWGGLRPGAPGLPP-AKVVAPRLSPGLQRTMEDLAVDKIVNNGVGLVDPRRARELYEGLHSHLQASGIDGVKVDVIHLLEMVCEEYGGRVELAKAYFAGLTESVRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDP 486          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.828e-55
Identity = 106/192 (55.21%), Postives = 137/192 (71.35%), Query Frame = 1
Query:  184 NGGDSSDNK---GMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPSGDPMVHF 750
            + G+ S+ K   G+ AF +DL+ +FK +D VYVWHALCG WGG+RP    L  K  +V  KLSPGL+ TMEDLAV +I    +G V P   +++Y+ +HS+L + GI GVKVDVIH LE +C+ YGGRVDLAK YY+ LT S+ K+F GNG+IASM   +DF  LGT+ I++GRVGDDFW  DP+GDPM  F
Sbjct:  371 SSGEKSEMKSEYGLKAFTKDLRTKFKGLDDVYVWHALCGAWGGVRPETTHLDTK--IVPCKLSPGLDGTMEDLAVVEISKASLGLVHPSQANELYDSMHSYLAESGITGVKVDVIHSLEYVCDEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSF 560          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 6.753e-49
Identity = 94/184 (51.09%), Postives = 119/184 (64.67%), Query Frame = 1
Query:  187 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPSGDP 738
            G D     GM AF +DL+  FK++D +YVWHALCG W G+RP    +  K  V   +LSP L  TM DLAVDK+V  G+G V P    + Y+ +HS+L  VG+ G K+DV   LE L E +GGRV+LAKAYY  LT S+ K+F G  VIASM   ++F  L T+ I++GRVGDDFW  DP GDP
Sbjct:  390 GSDDVSGSGMAAFTKDLRLRFKSLDDIYVWHALCGAWNGVRPETM-MDLKAKVAPFELSPSLGATMADLAVDKVVEAGIGLVHPSKAHEFYDSMHSYLASVGVTGAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDP 572          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.508e-40
Identity = 94/240 (39.17%), Postives = 132/240 (55.00%), Query Frame = 1
Query:   13 GGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPS 729
            GG  P  V+IDDGWQS+  DE  ++    N          RL   +EN KF+            +  +G  I D+K    ++  VYVWHA+ GYWGG++P + G+   ++ V  P  SPG+  +     ++ I  NG+G V PE V   Y  LHS+L  VG+DGVKVDV ++LE L   +GGRV LAK Y++AL AS+ ++F  NG+I+ M    D  L   +  A+ R  DDFW  DP+
Sbjct:  227 GGVTPKFVIIDDGWQSVGMDETSVEFNADNAANFAN----RLTHIKENHKFQKDGKEGHRVDDPSLSLGHVITDIKSN-NSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESITKNGLGLVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASISRNFPDNGIISCMSHNTD-GLYSAKKTAVIRASDDFWPRDPA 460          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.020e-36
Identity = 94/249 (37.75%), Postives = 134/249 (53.82%), Query Frame = 1
Query:    4 LVDGGCPPGLVLIDDGWQSISH---DEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFK---TVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDPS 729
            L +GG PP  ++IDDGWQ I +   DE+ +  EG        Q   RL+  +EN KF+        D  D +  G  ++ + D  K    V QVY WHAL GYWGG++P   G+    + +  P  SPG+     D+ +D +  +G+G V P+ V   Y  LHS+L   GIDGVKVDV +++E L    GGRV L ++Y +AL AS+ ++F  NG I+ M    D  L   +  A+ R  DDF+  DP+
Sbjct:  224 LSEGGTPPKFLIIDDGWQQIENKEKDENCVVQEGA-------QFATRLVGIKENAKFQK------SDQKDTQVSG--LKSVVDNAKQRHNVKQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVNPKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTD-GLYSAKQTAIVRASDDFYPRDPA 456          
BLAST of CX295827 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 93/246 (37.80%), Postives = 126/246 (51.22%), Query Frame = 1
Query:    4 LVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP----CRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVK-PKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMGALHDFMLLGTEAIALGRVGDDFWCTDP 726
            L  GG PP  V+IDDGWQS+  D             AG++       RL   +EN KF+    PN G  +        I  +  E   +  VYVWHA+ GYWGG+RP      E  +V+K P +S G+         D +   G+G V P+ V + Y  LHS+L   G+DGVKVDV  +LE L    GGRV+L + +++AL +SV K+F  NG IA M    D +    +A A+ R  DDF+  DP
Sbjct:  230 LAAGGTPPKFVIIDDGWQSVERDAT---------VEAGDEKKESPIFRLTGIKENEKFKKKDDPNVGIKN--------IVKIAKEKHGLKYVYVWHAITGYWGGVRPG----EEYGSVMKYPNMSKGVVENDPTWKTDVMTLQGLGLVSPKKVYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFPDNGCIACMSHNTDALYCSKQA-AVIRASDDFYPRDP 453          
The following BLAST results are available for this feature:
BLAST of CX295827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS5_ARATH1.868e-10773.47Probable galactinol--sucrose galactosyltransferase... [more]
RFS_PEA3.297e-10471.26Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS_ORYSJ2.613e-10171.26Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
STSYN_PEA4.828e-5555.21Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH6.753e-4951.09Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.508e-4039.17Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH5.020e-3637.75Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH2.578e-3237.80Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionC05076C10SK DroRLeaf1 Citrus clementina cDNA clone C05076C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295827 ID=CX295827; Name=CX295827; organism=Citrus clementina; type=EST; length=751bp
GGCCTCGTCGACGGAGGCTGCCCTCCCGGCCTCGTTCTCATCGACGACGG
GTGGCAGTCCATCAGCCACGATGAGGACCCGATCGACAGTGAAGGCATAA
ACCGTACGGCTGCTGGCGAGCAAATGCCATGCAGGCTCCTGAGGTATCAA
GAGAATTTCAAGTTCAGAGATTATGTCAGCCCTAACGGCGGTGACAGCAG
CGACAACAAAGGCATGGGTGCGTTCATTAGAGACTTGAAAGATGAGTTCA
AGACCGTCGACCAAGTCTACGTCTGGCATGCACTGTGTGGATACTGGGGT
GGGTTGCGGCCGAACATTCCCGGGCTGCCGGAGAAGACGACGGTGGTCAA
GCCCAAACTGTCGCCGGGATTGGAGCTTACGATGGAGGATCTCGCCGTCG
ACAAAATTGTCAACAACGGCGTCGGATTCGTCCCACCGGAGCTTGTTGAT
CAAATGTACGAAGGGCTTCACTCACACCTGGAGAAAGTCGGTATTGATGG
GGTCAAAGTCGACGTTATCCATTTGCTGGAGATATTGTGTGAGAATTATG
GAGGAAGGGTGGACTTGGCAAAAGCATATTACAAGGCATTAACAGCTTCT
GTAAGGAAGCACTTCAAGGGCAATGGTGTAATTGCCAGCATGGGAGCACT
GCACGATTTTATGTTACTTGGGACAGAGGCCATAGCTCTTGGTCGCGTTG
GTGATGATTTTTGGTGCACTGACCCATCTGGTGATCCAATGGTACATTTT
G
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