CX295828

Overview
NameCX295828
Unique NameCX295828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig82 contig Ccv1_Contig82:582..1272. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 390.578 bits (1002), Expect = 4.211e-108
Identity = 192/229 (83.84%), Postives = 208/229 (90.83%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNVEELLPVVYTPTVGEACQKYGSIF+RPQGLYISLKEKGK+L+VLKNWP++SIQVIVVTDGERILGLGDLGCQG+GIPVGKL+LYTALGG+RPSACLP+T+DVGTNNEQLLKDEFYIGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHLVFNDDIQ                   +LA+H FLFLGAGEAGTGIAELIALE+
Sbjct:  126 LLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQKSIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEQLLKDEFYIGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTGIAELIALEM 354          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 7.941e-107
Identity = 192/229 (83.84%), Postives = 204/229 (89.08%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNE+LL +EFYIGL+QRRATG+EY+E L EFMS VKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHL FNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+
Sbjct:  126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLANEFYIGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTGIAELIALEM 354          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 1.956e-105
Identity = 188/229 (82.10%), Postives = 202/229 (88.21%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNV ELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPE+SIQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPS+CLP+T+DVGTNNE+LL DEFYIGLRQRRATGQEYA  LDEFM AVKQNYGEKVL+QFEDFANHNAF+LL KY ++HLVFNDDIQ                   TLA+H FLFLGAGEAGTGIAELIA+E+
Sbjct:  124 LLIDNVAELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPVTIDVGTNNEKLLNDEFYIGLRQRRATGQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIAVEV 352          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 380.563 bits (976), Expect = 4.357e-105
Identity = 188/229 (82.10%), Postives = 204/229 (89.08%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNVEELLPVVYTPTVGEACQKYGSIFR+PQGLY+SLK+KGK+L+VL+NWPER+IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGG+RPSACLPIT+DVGTNNEQLL DEFYIGLRQRRATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LLAKY  +HLVFNDDIQ                   TLAEH +LFLGAGEAGTGIAELIALEI
Sbjct:  174 LLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEI 402          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.824e-104
Identity = 183/229 (79.91%), Postives = 205/229 (89.52%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLI+N+EELLP+VYTPTVGEACQKYG+IF+ PQGLYISLK+KGK+LE+LKNWP++ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LYTALGGIRPSACLPIT+DVGTNNE++L DEFYIGLRQRRA+G+EYAEL++EFMSAVKQNYGEKVLIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+H+FLFLGAGEAGTGIAELIALEI
Sbjct:  182 LLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEKMLNDEFYIGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGEAGTGIAELIALEI 410          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 2.923e-101
Identity = 178/229 (77.73%), Postives = 202/229 (88.21%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LL+D+VEELLP+VYTPTVGE CQKYGSIFRRPQGL+ISLK+KG+ILE+L+NWPE+ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGG+ PSACLPIT+DVGTNN++LL DEFYIGL+Q+RATG+EYAE + EFMSAVKQNYGEK+L+QFEDFANHNAFELL KY TTHLVFNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+
Sbjct:  120 LLVDHVEELLPLVYTPTVGEGCQKYGSIFRRPQGLFISLKDKGRILELLRNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVCPSACLPITLDVGTNNQKLLDDEFYIGLKQKRATGEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGEAGTGIAELIALEM 348          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.604e-99
Identity = 182/229 (79.48%), Postives = 197/229 (86.03%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNVEELLP+VYTPTVGEACQKYG IF+RPQGL+ SLKEKGKI EVLKNWPE+ IQVIVVTDGERILGLGDLGCQGMGIPVGKL+LY+ALGGIRPSACLP+T+DVG    + + DEFYIGLRQRRATGQEY+ELLDEFM AVKQNYGEKVLIQFEDFANHNAF LLAKYGT+HLVFNDDIQ                   +L+EH FLFLGAGEAGTGIAELIALE+
Sbjct:  110 LLIDNVEELLPIVYTPTVGEACQKYGWIFKRPQGLFFSLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVG-QTMKFVDDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEM 337          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.604e-99
Identity = 180/230 (78.26%), Postives = 199/230 (86.52%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLK-DEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLI+NVEELLP+VYTPTVGEACQKYGSIF   QGL+ISLK+KG+ILE+LKNWP + IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGG+RPSACLPIT+DVGTNNE+LL  DEFYIGL+Q+RA GQEYAEL++EFMSAVKQNYGE +LIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+ +FLFLGAGEAGTGIAELIALEI
Sbjct:  182 LLIENVEELLPIVYTPTVGEACQKYGSIFENSQGLFISLKDKGRILEILKNWPHKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEKLLNDDEFYIGLKQKRAAGQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGEAGTGIAELIALEI 411          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 6.094e-99
Identity = 180/229 (78.60%), Postives = 194/229 (84.72%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LLIDNV ELLP VYTPTVGEACQKYGSIF RPQGLY+SLK+KGK+LEVL+NWP R+IQVI VTDGERILGLGDLGCQGMGIPVGKLALYTALGG+ PS CLPIT+DVGTNNE LL DEFYIGLRQ+RATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LL KY  +HLVFNDDIQ                   TLAE  +LFLGAGEAGTGIAELIALEI
Sbjct:  171 LLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVSLKDKGKVLEVLRNWPHRNIQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCLPITIDVGTNNEFLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIALEI 399          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.152e-71
Identity = 132/227 (58.15%), Postives = 158/227 (69.60%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIAL 683
            +L  ++E  +P+VYTPTVG ACQ+YG  FRRP+GL+I++ ++G I  +LK+WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +DVGT+NE LLKD  YIGLR +R  GQ Y +LLDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++H  LF GAGEA  GIA LI +
Sbjct:   78 VLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHECLPVMLDVGTDNEALLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVM 304          
The following BLAST results are available for this feature:
BLAST of CX295828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_POPTR4.211e-10883.84NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_VITVI7.941e-10783.84NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_PHAVU1.956e-10582.10NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ4.357e-10582.10NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLAPR2.824e-10479.91NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR2.923e-10177.73NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC1.604e-9979.48NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_FLATR1.604e-9978.26NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE6.094e-9978.60NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_ANAPL3.152e-7158.15NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionC05076C11SK DroRLeaf1 Citrus clementina cDNA clone C05076C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295828 ID=CX295828; Name=CX295828; organism=Citrus clementina; type=EST; length=691bp
AGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCA
ACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCA
GGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGA
AGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAG
CGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGT
TGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCAT
GTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAG
GATGAATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATA
TGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAG
AAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAG
TTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACA
GGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGA
TTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAG
GCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATC
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