CX295829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 6.076e-81 Identity = 152/228 (66.67%), Postives = 169/228 (74.12%), Query Frame = 1 Query: 19 GVSSSPTLVGKISCSRRLSYSSNKLTLRTTSH----LAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 G+SS + + S + L R +H LAAFH QSHLF P + S + IFLPHLVASMEQVEETYIM+KPDGVQRGLVG+IISRFE CPK+LAEEHYKDL +K F+ KLI+YITSGPVVCMAWEG GVVAS+RKLIG+TDPLQAEPGTIRGDLAVQTGRNVVHGSDSP+NGKREIGLWFKEGE+CQWTPAQA WLRE Sbjct: 6 GLSSPCNCISSLPHSSSTTTRHQNLLFRRNNHHQQKLAAFHSQSHLFSTKCPLISHSLPRKKSFKPHIFLPHLVASMEQVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPVVCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIGLWFKEGEICQWTPAQAPWLRE 233
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 4.355e-79 Identity = 149/204 (73.04%), Postives = 163/204 (79.90%), Query Frame = 1 Query: 79 SSNKLTLRTTSHLAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 S ++ RT LAAF PQ LF + +R+ A +S E+GIFLPHLVASME VEETYIMVKPDG+QRGLVG+IISRFE QCPK+LAEEHYKDL++K FFP LIEYITSGPVVCMAWEG GVVASARKLIG TDPLQAEPGTIRGDLAVQTGRN+VHGSDSPENGKREIGLWFKEGELC+W A A WLRE Sbjct: 31 SPARVNFRTA--LAAFRPQFRLFSR-NSASRRRLRASSSAESGIFLPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.823e-78 Identity = 148/221 (66.97%), Postives = 165/221 (74.66%), Query Frame = 1 Query: 28 SSPTLVGKISCSRRLSYSSNKLTLRTTSHLAAFHPQSHLFVKFPPCPQRKTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 SSPT ++SC+ N + + HLAAF P HLF R ++ ++ T IFLPHLVASME+VEETYIM+KPDGVQRGLVG+IISRFE CPK+LAEEHYKDL SKPFFPKLI+YITSGPVVCMAWEG GVVASARKLIG+T+PL AEPGTIRGDLAVQTGRNVVHGSDSP+NGKREI LWF EGELC WTP Q WL E Sbjct: 19 SSPT--SRLSCAPSCKLILNPI--KKNHHLAAFQPAVHLFASNQ---SRSHASKRNHTTRIFLPHLVASMEEVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALWFGEGELCSWTPVQEPWLIE 232
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.921e-75 Identity = 143/228 (62.72%), Postives = 162/228 (71.05%), Query Frame = 1 Query: 13 ALGVSSSPTLVGKISCSRRLSYSSNKLTLRTTSHLAAFHPQSHLFVKFPPCPQRKTV--ARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 A+ V S L S + + LRTT +L+AF +SHLF R+S E+GIFLP L+ S+EQV++ YIMVKPDGVQRGLVG+IISRFE QC K+LAEEHYK LN K FFPKLIEYITSGPVV MAWEG GVV SARKLIG+TDPLQAEPGTIRGD AVQTGRN++HGSDSPENG+REI LWFKEGELC+WTP Q WLRE Sbjct: 3 AMAVFSGSNLFATSSLLLTTNSKTRYSQLRTTQNLSAFSSKSHLFSPSSTSSSYPKTFRTRSSTESGIFLPRLITSLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGEREIALWFKEGELCEWTPVQEPWLRE 230
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_THEEB (Nucleoside diphosphate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ndk PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.973e-47 Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++ +KPDGVQRGLVG II RFE + ++LAE+HY + KPFFP L+ +ITSGPVV M WEG GV+A+ARKLIG+T+PL AEPGT+RGD AV GRNV+HGSDSPEN +REI LWF+ EL W PA W+ E Sbjct: 1 MERTFLAIKPDGVQRGLVGTIIQRFEQKGYTLVGLKLMRVSRELAEQHYGEHKDKPFFPGLVNFITSGPVVAMVWEGRGVIANARKLIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAEREINLWFQTQELVPWEPALTSWVYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46 Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T+I +KPDGVQRGLVG II R E Q ++LAE HY + +PFFP L+++ITSGPVV M W+G GV+A+ARKLIG T+PL AEPGTIRGD + GRN+VHGSD PE +REI LWF+E EL WTPA W+ E Sbjct: 1 MERTFIAIKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.721e-46 Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++ +KPDGVQRGLVG+II RFE Q K+LAE+HY +PFFP L+E+ITSGPVV M WEG GV+ASARK+IG+T+PL AEPGTIRGD + GRN++HGSD+PE ++E+ LWF + EL W P WL E Sbjct: 1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.721e-46 Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++ +KPDGVQRGLVG+II RFE Q K+LAE+HY +PFFP L+E+ITSGPVV M WEG GV+ASARK+IG+T+PL AEPGTIRGD + GRN++HGSD+PE ++E+ LWF + EL W P WL E Sbjct: 1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45 Identity = 84/148 (56.76%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 E T+I +KPDGVQRGL+G+I+ RFE ++LAE+HY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL+AEPGTIRGDLA+ GRNV+HGSD+PE + EIGLWF+ EL WTP+ W E Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGWRTE 151
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45 Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++ VKPDGVQR LVG+II RFE KDLAE+HY + KPFFP L+++ITSGPVV M WEG GVVASARK+IG+T+PL +EPGTIRGD V GRN++HGSD+ E +REI LWF+ EL W P W+ E Sbjct: 1 MERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQREIALWFQPAELVSWEPTLTSWIYE 149 The following BLAST results are available for this feature:
BLAST of CX295829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295829 ID=CX295829; Name=CX295829; organism=Citrus clementina; type=EST; length=710bpback to top |