CX295835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.458e-39 Identity = 83/156 (53.21%), Postives = 113/156 (72.44%), Query Frame = 3 Query: 258 GYETFDHFHEDKTSTKRKQIYG------REFQAMMDCLEEEDCREE-------ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKL 686 G+ H DK + R G ++ M D LE++ E+ +S A EKKRRL V+QVKALEKNFE+DNKLEP+RKVKLA+ELGLQPRQ+A+WFQNRRAR K+K+LERDYG+LK+N+DAL+ + ++LQ++N++L +++ELKAKL Sbjct: 13 GFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKL 168
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.438e-38 Identity = 91/185 (49.19%), Postives = 123/185 (66.49%), Query Frame = 3 Query: 144 MKRFSSSDSFDALITVYKSAGKHNSTTDLS*S*VFLFMGYETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEED--CREEASQA--TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKL 686 MKR SSSDS LI++ + D+ S +R GREFQ+M++ EEE+ EE +EKKRRL+++QVKALEKNFE++NKLEP+RKVKLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR + ++L+++NE+L E+ +LK KL Sbjct: 2 MKRLSSSDSVGGLISLCPTTST--------------------------DEQSPRRYG--GREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKL 158
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 73/135 (54.07%), Postives = 102/135 (75.56%), Query Frame = 3 Query: 318 YGREFQAMMD-------CLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENE 701 YG +Q+M++ +EE +EKKRRL VDQVKALEKNFE++NKLEP+RK KLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR + ++L+++N++L E+ ++KAK+ E + Sbjct: 26 YGSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEED 160
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 68/101 (67.33%), Postives = 90/101 (89.11%), Query Frame = 3 Query: 393 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQE 695 EKKRRL+V+QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YD+LRLDH+ L+++ +AL AE++ELKAKL E Sbjct: 50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE 150
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 68/101 (67.33%), Postives = 90/101 (89.11%), Query Frame = 3 Query: 393 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQE 695 EKKRRL+V+QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YD+LRLDH+ L+++ +AL AE++ELKAKL E Sbjct: 50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE 150
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 67/111 (60.36%), Postives = 89/111 (80.18%), Query Frame = 3 Query: 366 CREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQEN 698 C EKKRRL+V+QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YDALR DH+ L+++ +AL AE++ELK KL E+ Sbjct: 33 CGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDED 143
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33 Identity = 67/111 (60.36%), Postives = 89/111 (80.18%), Query Frame = 3 Query: 366 CREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQEN 698 C EKKRRL+V+QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY L+ +YDALR DH+ L+++ +AL AE++ELK KL E+ Sbjct: 33 CGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDED 143
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 61/98 (62.24%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 393 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKL 686 EKKRRL ++QV+ALE++F+ DNKL+PDRK ++A +LGLQPRQ+AVWFQNRRAR K+K+LERD+ L+A +DALR D + L+++ +AL AE+REL+ KL Sbjct: 71 EKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKL 168
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 64/107 (59.81%), Postives = 83/107 (77.57%), Query Frame = 3 Query: 357 EEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELK 677 EED ++ SQ EKKRRL ++QVK LEKNFE+ NKLEP+RK++LA LGLQPRQIA+WFQNRRAR K+K+LE+DY LK +D L+ +++ LQ N+ L AE+ LK Sbjct: 72 EEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK 178
BLAST of CX295835 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 72/126 (57.14%), Postives = 92/126 (73.02%), Query Frame = 3 Query: 324 REFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENE 701 R F D L EE+ +E Q EKKRRLT +QV LE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERD+ LKA++DALR DH+ L Q+N L +++ L KL QE E Sbjct: 55 RPFFTTPDELLEEEYYDE--QLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKL-QEKE 177 The following BLAST results are available for this feature:
BLAST of CX295835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295835 ID=CX295835; Name=CX295835; organism=Citrus clementina; type=EST; length=721bpback to top |