CX295848

Overview
NameCX295848
Unique NameCX295848
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295848 vs. ExPASy Swiss-Prot
Match: BCAL1_ARATH (Branched-chain-amino-acid aminotransferase-like protein 1 OS=Arabidopsis thaliana GN=At3g05190 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 6.302e-105
Identity = 177/236 (75.00%), Postives = 206/236 (87.29%), Query Frame = 2
Query:   23 NLDIPFQATMLRWEAGPKPIDGLWAKWWYESVHKSTGFTSAREYPMPFPMSLYDLLEQSVPFYNMLRRNVRKTSSLLKSPLPEPDLAVPANKNLLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLFDSAKALAFNNIPTHEEVKQAIFRTLIRNGMLDNAHIRLTLTRGKKVTSGMSPAFNLYGCTLIVLPEWKPPVYDNTHGVNLVTATTRRNSPN 730
            +L+IPFQA+ML+W+AGP P DG+WA WWY+SVH+STGF+S ++YP  FP+S YDLLE+S+P YN+LR +V+ +SSLL SPLP P L VP N  LLAWVGDEI+PR+ AKVSVFDS+VQGGD VWEGLR+Y GK+FKLEEHLDRLFDSAKALAF+N+P  EEVK+AIFRTLI NGM DN HIRL+LTRGKKVTSGMSPA+N YGCTLIVL EWKPPVYDN  G+ LVTATTRRNSPN
Sbjct:  169 DLEIPFQASMLKWKAGPIPEDGVWAPWWYKSVHESTGFSSPKKYPRTFPLSHYDLLERSLPLYNILRSHVKHSSSLLSSPLPPPSLPVPENAKLLAWVGDEILPREMAKVSVFDSVVQGGDSVWEGLRIYKGKIFKLEEHLDRLFDSAKALAFDNVPAREEVKEAIFRTLITNGMFDNTHIRLSLTRGKKVTSGMSPAYNRYGCTLIVLAEWKPPVYDNEGGIVLVTATTRRNSPN 404          
BLAST of CX295848 vs. ExPASy Swiss-Prot
Match: BCAL2_ARATH (Branched-chain-amino-acid aminotransferase-like protein 2 OS=Arabidopsis thaliana GN=At5g27410 PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.834e-104
Identity = 179/236 (75.85%), Postives = 202/236 (85.59%), Query Frame = 2
Query:   23 NLDIPFQATMLRWEAGPKPIDGLWAKWWYESVHKSTGFTSAREYPMPFPMSLYDLLEQSVPFYNMLRRNVRKTSSLLKSPLPEPDLAVPANKNLLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLFDSAKALAFNNIPTHEEVKQAIFRTLIRNGMLDNAHIRLTLTRGKKVTSGMSPAFNLYGCTLIVLPEWKPPVYDNTHGVNLVTATTRRNSPN 730
            +L+IPFQA+ML+WEAGP P DGLWA WWYE++HKSTGF+S ++YP  FP+  YDLLEQ +P YN+LR +++  SSLL S LP P L VP N  LLAWVGDEIVPR+ AKVSVFDS+VQGGD VWEGLR+Y GKVFKLEEHLDRL DSAKALAFNN+PT EE+K+AIFRTLI NGM DN HIRL+LTRGKKVTSGMSPAFN YGCTLIVL EWKPPVYDN  G+ LVTATTRRNSPN
Sbjct:  166 DLEIPFQASMLKWEAGPIPEDGLWAPWWYETLHKSTGFSSPQKYPQTFPLMHYDLLEQCLPLYNILRCHMKHKSSLLSSTLPPPSLPVPENAKLLAWVGDEIVPREMAKVSVFDSVVQGGDSVWEGLRIYKGKVFKLEEHLDRLSDSAKALAFNNVPTREEIKEAIFRTLITNGMFDNTHIRLSLTRGKKVTSGMSPAFNRYGCTLIVLAEWKPPVYDNDGGIVLVTATTRRNSPN 401          
BLAST of CX295848 vs. ExPASy Swiss-Prot
Match: ILVE_ARCFU (Putative branched-chain-amino-acid aminotransferase OS=Archaeoglobus fulgidus GN=ilvE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  302 LLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLFDSAKALAFNNIPTHEEVKQAIFRTLIRNGMLDNAHIRLTLTRGKKVTSGMSPAFNLYGCTLIVLPEWKPPVYDNTH--GVNLVTATTRRNS 724
            L  ++  E VP ++AKVS+FD     GDGV+EG+R YNG+VF+L+EH+DRL+DSAKA+      T EE  + I  TL +N + D A+IR  +TRG     G+ P        +++   W   +Y + +  G+  +T   RRNS
Sbjct:    2 LYVYMDGEFVPENEAKVSIFDHGFLYGDGVFEGIRAYNGRVFRLKEHIDRLYDSAKAIDLEIPITKEEFMEIILETLRKNNLRD-AYIRPIVTRGIG-DLGLDPRKCQNPSIIVITKPW-GKLYGDLYEKGLTAITVAVRRNS 141          
BLAST of CX295848 vs. ExPASy Swiss-Prot
Match: ILVE_METJA (Putative branched-chain-amino-acid aminotransferase OS=Methanocaldococcus jannaschii GN=ilvE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 2
Query:  311 WVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLFDSAKALAFNNIPTHEEVKQAIFRTLIRNGMLDNAHIRLTLTRG 586
            ++  + V   DAKVSVFD  +  GDGV+EG+R Y+G VF L+EH+DRL+DSAK+L  +   T EE+   +  TL  N + D A+IRL +TRG
Sbjct:    4 YLNGKFVDEKDAKVSVFDHGLLYGDGVFEGIRAYDGVVFMLKEHIDRLYDSAKSLCIDIPLTKEEMIDVVLETLRVNNLRD-AYIRLVVTRG 94          
BLAST of CX295848 vs. ExPASy Swiss-Prot
Match: DAAA_LISIN (D-alanine aminotransferase OS=Listeria innocua GN=dat PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  314 VGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLFDSAKALAFNNIPTHEEVKQAIFRTLIRNGMLDNAHIRLTLTRG 586
            V D +V R+DA V V D   Q GDGV+E +R+YNGK F   EH+DRL+ SA  +    IP  +E  +A+   L+    ++  ++ L +TRG
Sbjct:    5 VNDRLVERNDATVDVEDRGYQFGDGVYEVVRLYNGKFFTYNEHIDRLYASAAKIDL-VIPYSKETLRALLDKLVAENNINTGNVYLQVTRG 94          
The following BLAST results are available for this feature:
BLAST of CX295848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BCAL1_ARATH6.302e-10575.00Branched-chain-amino-acid aminotransferase-like pr... [more]
BCAL2_ARATH1.834e-10475.85Branched-chain-amino-acid aminotransferase-like pr... [more]
ILVE_ARCFU5.289e-1939.86Putative branched-chain-amino-acid aminotransferas... [more]
ILVE_METJA1.219e-1548.91Putative branched-chain-amino-acid aminotransferas... [more]
DAAA_LISIN6.923e-1140.66D-alanine aminotransferase OS=Listeria innocua GN=... [more]
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Properties
Property NameValue
Genbank descriptionC05076E07SK DroRLeaf1 Citrus clementina cDNA clone C05076E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295848 ID=CX295848; Name=CX295848; organism=Citrus clementina; type=EST; length=732bp
GAGGCTTTCGCAGTCTTTGTGAAACTTGGATATTCCTTTTCAAGCCACAA
TGCTGAGATGGGAAGCTGGTCCAAAACCAATAGATGGCCTTTGGGCTAAG
TGGTGGTATGAAAGTGTACATAAATCTACAGGTTTCACATCAGCAAGAGA
GTATCCCATGCCATTTCCTATGTCTCTTTACGATTTGCTGGAGCAAAGTG
TACCTTTTTACAACATGCTCAGGCGCAATGTCAGAAAAACTTCATCCCTT
CTGAAGAGTCCATTACCTGAACCAGATCTTGCGGTTCCTGCAAATAAAAA
TCTTCTTGCATGGGTTGGTGATGAGATTGTGCCCCGTGATGATGCAAAGG
TTTCTGTGTTTGACTCAATTGTCCAAGGTGGTGATGGAGTGTGGGAGGGA
CTCCGAGTTTACAATGGCAAGGTATTTAAGCTTGAAGAGCATTTAGATAG
GCTGTTTGACTCAGCAAAGGCTTTGGCTTTCAACAATATTCCGACCCATG
AAGAGGTTAAGCAAGCCATCTTCAGAACTCTCATTAGGAATGGTATGCTG
GATAATGCACACATCCGGCTAACACTCACTCGTGGCAAAAAGGTTACTTC
TGGCATGAGCCCAGCATTTAATCTTTATGGATGCACACTAATCGTGCTTC
CTGAATGGAAACCCCCAGTCTATGACAATACACATGGTGTAAATTTGGTC
ACAGCAACCACACGTCGTAATTCTCCTAATAA
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