CX295849

Overview
NameCX295849
Unique NameCX295849
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.513e-55
Identity = 95/163 (58.28%), Postives = 125/163 (76.69%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY LILY+MIG  W + KF  F+Y+M  SFI FTLYGMM++ALTP  Q+A I +SFFLS+WNLFSGFL+ R  IP+WWRWYYW +PVAW LYGL+T QVGD +S+V I    +  + +K  +++ + F+ DF+PVV+++HI W+ +FLFVFAY IK +NFQRR
Sbjct: 1294 VYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTLYGMMLMALTPNYQIAGICMSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAWTLYGLITSQVGDKDSMVHISGIGD--IDLKTLLKEGFGFEHDFLPVVAVVHIAWILLFLFVFAYGIKFLNFQRR 1454          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.581e-55
Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY LILY+MIG+ W + KF  F+Y+M   F+ FTLYGMM+VALTP  Q+A I LSFFLS WNLFSGFL+ R  IP+WWRWYYW SPVAW LYG++T QVGD +S+V I    +  M++K  +++ + F  DF+PVV+++HI W+ +FLF FAY IK +NFQRR
Sbjct: 1293 VYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALTPNYQIAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAWTLYGIITSQVGDRDSIVHITGVGD--MSLKTLLKNGFGFDYDFLPVVAVVHIAWILIFLFAFAYGIKFLNFQRR 1453          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49
Identity = 86/163 (52.76%), Postives = 117/163 (71.78%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY L+L++MIG++W   KF  F+YF++  F  F++YGMM+VALTPG Q+A IV+SFFLS WNLFSGFL+ R  IPVWWRWYYW SPVAW +YG+   QVGD    +E+  G   K+ V +F+++   +  DF+ VV   H+ W+ +F FVFAY IK +N+Q+R
Sbjct: 1300 VYSLLLFSMIGYQWTAVKFFYFYYFIFMCFTYFSMYGMMVVALTPGYQIAAIVMSFFLSFWNLFSGFLIPRPLIPVWWRWYYWASPVAWTIYGIFASQVGDRTDELEL-TGETEKIQVNEFLKEYLGYDHDFLLVVVFAHVGWVLLFFFVFAYGIKFLNYQKR 1461          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.587e-47
Identity = 89/163 (54.60%), Postives = 114/163 (69.94%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY LI+Y+MIGF+W + KF   F+FM+ +F+ FT +GMM VA+TP Q VA+IV  FF +VWNLFSGF+V R  IP+WWRWYYW  P+AW LYGLV  Q GDL+    + D N    TV+QF+  N+ FK DF+ VV+ + + +  VF F FA  IKA NFQRR
Sbjct: 1279 VYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQD--PLTDQN---QTVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.087e-45
Identity = 83/162 (51.23%), Postives = 115/162 (70.99%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            Y +I+YAMIGF+W++GKF  + + M+ + + FT YGMM VA+TP Q VA+IV +FF  VWNLFSGF++ R  +PVWWRWYYW +PVAW LYGLV  Q GD+++ +      +   TV+QF+   + FK DF+ VV+ +   ++ +F F FA+AIKA NFQRR
Sbjct: 1279 YGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQTKL------SDNETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.854e-45
Identity = 82/163 (50.31%), Postives = 113/163 (69.33%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY LI+YAMIGF+W   KF  + +FM+ SF+ FT YGMM VA+TP   +A++V S F  +WNLFSGFL+ R  +PVWW WYYWL PVAW LYGL+  Q GD+     + D N   M+VKQFI + Y +++ F+ VV+ M++++  +F  +FA  IK+ NFQ+R
Sbjct: 1266 VYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITE--PMADSN---MSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.050e-44
Identity = 77/163 (47.24%), Postives = 112/163 (68.71%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y +++Y+MIGF+W + KF  + +FM+ + + FT YGMM V LTP + +A I+ S F +VWNLFSG+L+ R  IPVWWRWY W+ PVAW LYGLV  Q GD++ ++E         TV QF+ D + F  +F+ VV+++H+V+   F F+F++AI   NFQRR
Sbjct: 1293 IYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLE-----GDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.677e-44
Identity = 74/163 (45.40%), Postives = 113/163 (69.33%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y +++Y+MIG++W+  KF  F +FM A+F  FTL+ MM+VA T  + +A +++SF LS WN F+GF++ R  IPVWWRW+YW +PV+W +YG++  Q  D + +V +P G +T M VK F+E N  FK DF+  V + H  ++ +F F+F Y IK +NFQ+R
Sbjct: 1293 LYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFADSDRVVTVP-GQSTTMVVKDFLEKNMGFKHDFLGYVVLAHFGYVIIFFFLFGYGIKCLNFQKR 1454          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.329e-43
Identity = 79/162 (48.77%), Postives = 112/162 (69.14%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            Y LI+YAM+GF+W+  KF  F +  + SF+ +T YGMM V+LTP QQVA+I  S F  ++NLFSGF + R  IP WW WYYW+ PVAW +YGL+  Q GD+E+ +++  G    +TVKQ+IED+Y F+ DF+  V+ + I +   F F+FA+ I+ +NFQ R
Sbjct: 1309 YSLIVYAMVGFEWKAEKFFWFVFVSYFSFLYWTYYGMMTVSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYGDVETRIQVL-GGAPDLTVKQYIEDHYGFQSDFMGPVAAVLIAFTVFFAFIFAFCIRTLNFQTR 1469          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.048e-43
Identity = 75/163 (46.01%), Postives = 109/163 (66.87%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y L++Y+MIGF W   KF  + +FM+ +F+ FT YGMM VA+TP   +A IV + F ++WN+F+GF++ R  IP+WWRWYYW  PVAW LYGLV  Q G+    +     ++   TVK F+     F+ DF+PVV +M +V+  +F  +FA++IK +NFQRR
Sbjct: 1284 LYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTM-----SDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441          
The following BLAST results are available for this feature:
BLAST of CX295849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
AB39G_ARATH1.513e-5558.28ABC transporter G family member 39 OS=Arabidopsis ... [more]
AB34G_ARATH2.581e-5558.28ABC transporter G family member 34 OS=Arabidopsis ... [more]
PDR2_NICPL2.764e-4952.76Pleiotropic drug resistance protein 2 OS=Nicotiana... [more]
PDR1_NICPL2.587e-4754.60Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
PDR1_TOBAC1.087e-4551.23Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
AB40G_ARATH1.854e-4550.31ABC transporter G family member 40 OS=Arabidopsis ... [more]
PDR4_ORYSJ2.050e-4447.24Pleiotropic drug resistance protein 4 OS=Oryza sat... [more]
PDR5_ORYSJ2.677e-4445.40Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
AB36G_ARATH1.329e-4348.77ABC transporter G family member 36 OS=Arabidopsis ... [more]
TUR2_SPIPO5.048e-4346.01Pleiotropic drug resistance protein TUR2 OS=Spirod... [more]

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Properties
Property NameValue
Genbank descriptionC05076E08SK DroRLeaf1 Citrus clementina cDNA clone C05076E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295849 ID=CX295849; Name=CX295849; organism=Citrus clementina; type=EST; length=715bp
TTTTTTTTTTTTTTTTTTCTGTCAAAAAAATACTTGCATTCTTATTGAAC
AAAGTACATTACAAACATACATTTATATCACAGTCAATTACTAAACAAGA
AAAAGGAAGTACAAAAGAAAAAAAAAATGTGGTAACCTTTTGTTTCCCAC
ATGCTCACTTAGGTCTACCATTCTTAAGATTTAAGCTGGTTTATCTCCTT
TGGAAGTTGATGGCCTTGATGGCATAGGCAAACACAAACAAGAACACAGC
CATCCAGACAATATGCATGATACTAACGACAGGAATGAAATCTTTCTTGA
AATCATAATTATCTTCGATGAATTGCTTCACTGTCATTTTAGTATTATTA
CCATCAGGAATCTCCACAAGTGACTCTAAGTCACCAACTTGACAAGTCAC
AAGGCCATACAGATTCCAAGCCACCGGAGAAAGCCAGTAGTACCACCTCC
ACCAGACAGGAATATCCGATCTGGCAACGAGGAAACCGGAGAACAAGTTC
CATACACTAAGGAAGAAGGACAAGACAATGGTAGCAACTTGCTGGCCAGG
AGTCAATGCGACAATCATCATTCCGTACAATGTGAAAATGATAAAAGACG
CCCACATGAAGTAGAAGAACAAGCAGAATTTTCCCAGCTCCCACTTGAAT
CCAATCATCGCGTAAAGGATAAGAACATACACACACTTTGAACTGATACA
TATATTATCTCTACG
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