CX295862

Overview
NameCX295862
Unique NameCX295862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10111 contig Ccv1_Contig10111:384..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295862 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28
Identity = 65/166 (39.16%), Postives = 100/166 (60.24%), Query Frame = 2
Query:    5 NGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSPYDNST-IVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVL 499
            +G+++++ +QY+++S+I                 CP  V+Q  S +  G  +I S  D+   +VR STD+N+ FV +    + C+   +W++DNYD S+G+W++TT G+ G PG  TL +WFK+EK  + G YK   CPSVC+SC  LCS +GR S +DG  RL L
Sbjct:   35 DGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD--RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG-YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX295862 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 58/175 (33.14%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    2 VNGNKVESTLQYHIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSAIQWGKKLILSPYD-NSTIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRDDEP 517
            ++G K+ +   Y+IV  +                   CP  V+Q    +   + L   P +    +VR STDLN+ F   +    +     +W++D YD S+G++F+T GG+ G+PG ET+ +WFK+E+    G YK+V CP+VC SC   C  VG +  + G RRL L   D+P
Sbjct:   39 IDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC--RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLAL--SDKP 209          
BLAST of CX295862 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 2
Query:    2 VNGNKVESTLQYHIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSAIQWGKKLILSPYDN--STIVRESTDLNLRFVGLLSGSKQCNELPLWKVDNYDASSGRWFITTGGLDGHPGAETLLNWFKLEKTNLPGAYKIVHCPSVCESCVKLCSSVGRFSFEDGVRRLVLVRD 508
            ++G  V   + Y +VSAIW                 CPL V+Q P     G+ +I S   N    IV ES DLN++F   ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K  LP +YK   CPS   + +  C++V  F  +  +RRL+L  D
Sbjct:    9 IDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDP--FDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
The following BLAST results are available for this feature:
BLAST of CX295862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.207e-2839.1621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU4.159e-2133.14Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.361e-1634.30Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionC05076F09SK DroRLeaf1 Citrus clementina cDNA clone C05076F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295862 ID=CX295862; Name=CX295862; organism=Citrus clementina; type=EST; length=716bp
TGTCAATGGCAACAAGGTTGAATCCACTCTTCAGTACCATATAGTCTCAG
CCATCTGGGGAGCTGGCGGCGGTGGAGTTAGCCTACACGGAGGCAGAAAC
GGATACTGTCCGTTGGATGTTATCCAATTACCTTCTGCTATCCAATGGGG
AAAGAAATTAATACTGTCACCATATGACAATTCTACAATTGTCAGAGAAT
CCACTGATCTCAACTTGAGATTCGTAGGGTTACTATCTGGAAGTAAGCAA
TGTAACGAGCTACCGTTGTGGAAAGTTGATAACTATGACGCTTCATCAGG
CAGATGGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAA
CGTTGCTAAATTGGTTTAAGCTTGAGAAAACTAATCTACCAGGTGCATAC
AAAATTGTTCATTGTCCATCTGTTTGCGAGTCTTGCGTCAAACTCTGCAG
CAGCGTTGGCCGCTTTTCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGG
TTCGTGATGATGAGCCGGCTTTTCCTGTTGTGTTAATTCCAGCTAGAGAA
AGATCGACGTCTGTGTAATCAATGTACCCTAACCGGCTAGCAGTATTATT
ATTCTAAATAACGGACCAGGCTAGCTGCTCTTTAATCTCTAGGATTAATA
AATTATGAAGAAGAAGCCTGTGATCCTTTCGGTGTTAATAATTCACTGTT
GGCTGTATCCTTATAC
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