CX295866

Overview
NameCX295866
Unique NameCX295866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14196 contig Ccv1_Contig14196:717..1421. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 2.045e-97
Identity = 180/233 (77.25%), Postives = 194/233 (83.26%), Query Frame = 2
Query:    5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            DVILR           V+ DHLHATAFQYTPLGRTILGPAQN+K+IT+E LQNYI THYTA RMVIAA+GA            LFTKLS+DPTT SQLVANEPA FTGSEVR+IDDD+PLAQFAVAF GASWTDPDS+ALMVMQ MLGSWNKN  GGKH+GS+L QRV INEIAES+MAFNTNYKDTGLFGVYAVAK DCLDDL+YAIMYE TKLAYRVS+ADVTRA  QLKS
Sbjct:  216 DVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPASFTGSEVRMIDDDLPLAQFAVAFEGASWTDPDSVALMVMQTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKS 448          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.632e-47
Identity = 102/235 (43.40%), Postives = 145/235 (61.70%), Query Frame = 2
Query:    5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSAD-PTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            DVILR           V+FDHLHATA+Q+ PLGRTILGP +NI+ IT+  L NYI  +YTA RMV+  +G              F+KL A  P +++ +++ +   F GS++RI DD IP A  A+A  G SW+D D    +V QA++G+++K      H GS+L+  V  +++A S M+F+T+Y DTGL+G+Y V  K D +DDL +  + E T+L   VSEA+V RA  QLK+
Sbjct:  159 DVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYTADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDTIPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAKAQLKA 393          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44
Identity = 94/232 (40.52%), Postives = 137/232 (59.05%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I ++ L +YI THY  PR+V+AA+G              F +  +  T   ++ A  P  FTGSE+R+ DD +PLA  AVA     W  PD+I LMV   ++G+W+++  GG ++ S+LAQ      +  S  +FNT+Y DTGL+G+Y V +P  + D+ + +  E  +L   V+E++V RA   LK+
Sbjct:  178 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVSHDELLELAKFHFGESLS--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLAVAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKT 407          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44
Identity = 93/232 (40.09%), Postives = 136/232 (58.62%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F       T   ++ A  P  FTGSE+R+ DD +PLA  A+A     W  PD+I LMV   ++G+W+++  GG ++ S+LAQ      +  S  +FNT+Y DTGL+G+Y V +P  + D+ + +  E  +L   V+E++V RA   LK+
Sbjct:  177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLC--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKT 406          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44
Identity = 97/234 (41.45%), Postives = 138/234 (58.97%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQ--LVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F     D   A +  + A  P  FTGSE+R+ DD +PLA  AVA     WT PD+I LMV   ++G+W+++  GG ++ S+LAQ      +  S  +FNT+Y DTGL+G+Y V +   + D+ +A+  E  +L   VSE++V RA   LK+
Sbjct:  177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHF----GDSLCAHKGDVPALPPCKFTGSEIRVRDDKMPLAHLAVAIEAVGWTHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAKNLLKT 406          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_LENED (Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43
Identity = 94/236 (39.83%), Postives = 136/236 (57.63%), Query Frame = 2
Query:    5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKL--SADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-LDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            DVILR           V+FDHLHA AFQ  PLGRTILGP  NI +I ++ L +YI T+YTA RMV+  +G              F+ L  SA+P    +L +     F GSE RI DD++P A  A+A  G  W+ PD   +MVMQ++ G+W+++      + S L+  +  N +A S M+F+T+Y DTGL+G+Y V++    LDD  +  + E T+++   +E +V RA  QLK+
Sbjct:  148 DVILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIRDDELPTAHVAIAVEGVGWSSPDYFPMMVMQSIFGNWDRSLGASSLLSSRLSHIISSNSLANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVERAKSQLKA 383          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43
Identity = 92/232 (39.66%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I+++ L +YI THY  PR+V+AA+G              F       T   ++ A  P  FTGSE+R+ DD +PLA  A+A     W  PD+I LMV   ++G+W+++  GG ++ S+LAQ      +  S  +FNT+Y DTGL+G+Y V +   + D+ + +  E  +L   V+E++V RA   LK+
Sbjct:  177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFGDSLC--THKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKT 406          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.469e-42
Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FD+LHATA+Q T LGRTILGP +NIK+I ++ L +YI THY  PR+V+AA+G              F         A  + A  P  FTGSE+R+ DD +PLA  A+A     W  PD+I LMV   ++G+W+++  GG ++ S+LAQ      +  S  +FNT+Y DTGL+G+Y V +   + D+ + +  E  +L   V+E++V RA   LK+
Sbjct:  177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGA--IPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNLLKT 406          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.047e-41
Identity = 90/231 (38.96%), Postives = 129/231 (55.84%), Query Frame = 2
Query:    5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQL 697
            D IL            V+FD LHA AFQ + LGRTILGP +NIK+IT+E +Q +I+ +YT  R+VI+A+GA             F  +     +     A     F GSE+R+ DD+ PL  FAVA     WTDPD   L ++Q M+G+WN+    GK++ S L + V   ++AES   F T Y+DTGLFG Y V +P+ +DDL   ++ E  ++A   ++ +V R   +L
Sbjct:  154 DTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQEFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAAGKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQKL 384          
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.261e-38
Identity = 100/233 (42.92%), Postives = 132/233 (56.65%), Query Frame = 2
Query:    8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703
            VILR           V+FDHLHA AF    LG TILGP +NI+T+++  LQ YI  +YTA RMV+  +G              F KL   P  + +     PA FTGS+VRI  DD+P A  A+A  GASWT  D   L+V  AM+GS+++ + G  H  S+LAQ V  + +A S  +FNT Y DTGL+G+Y  +   D LDDLA+  + E  +LA   SE +V  A  QLK+
Sbjct:  155 VILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYTADRMVVVGAGNVDHAELCKLAETNFGKL---PQGSGKAKFVRPA-FTGSDVRIRVDDMPTAHIALAVEGASWTSADHWPLLVASAMIGSYDR-AAGNAHPSSKLAQIVAKHNLANSFTSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAIAKQQLKT 382          
The following BLAST results are available for this feature:
BLAST of CX295866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
MPPB_ARATH2.045e-9777.25Probable mitochondrial-processing peptidase subuni... [more]
MPPB_NEUCR9.632e-4743.40Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_BOVIN2.623e-4440.52Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_PONAB7.632e-4440.09Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_RAT9.968e-4441.45Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_LENED6.461e-4339.83Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_HUMAN6.461e-4339.66Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_MOUSE5.469e-4239.66Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_DICDI6.047e-4138.96Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_BLAEM1.261e-3842.92Mitochondrial-processing peptidase subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionC05076G01SK DroRLeaf1 Citrus clementina cDNA clone C05076G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295866 ID=CX295866; Name=CX295866; organism=Citrus clementina; type=EST; length=705bp
GGGGGATGTTATTTTGAGAGAAATGGAGGAGGTTGAGGGGCAAACAGAGG
AAGTCATTTTTGATCATTTGCATGCAACTGCATTCCAGTACACTCCTTTG
GGGAGAACTATTCTCGGTCCTGCTCAGAATATCAAGACAATCACAAAAGA
ACATCTGCAGAACTATATTCACACTCACTATACTGCTCCCAGAATGGTGA
TTGCTGCTTCTGGAGCTGTGAAGCATGAAGAAGTTGTTGAGCAAGTGAAG
AAATTGTTCACAAAATTATCAGCGGATCCAACCACTGCTTCTCAATTAGT
TGCAAATGAACCAGCAATTTTCACTGGTTCTGAGGTTAGAATAATTGATG
ACGATATTCCTTTGGCACAATTTGCGGTTGCTTTCGCTGGAGCATCTTGG
ACAGATCCAGATTCAATTGCCCTGATGGTTATGCAGGCAATGTTGGGTTC
ATGGAATAAAAATTCAGTGGGTGGAAAGCACATGGGTTCCGAGCTGGCAC
AGAGAGTTGGCATTAATGAAATTGCAGAAAGCATGATGGCCTTCAACACG
AACTACAAAGACACTGGTCTGTTTGGTGTTTATGCTGTTGCTAAGCCGGA
TTGCTTAGATGATTTGGCCTATGCAATTATGTACGAGACTACCAAGTTAG
CTTATCGGGTTTCAGAAGCTGATGTCACTCGTGCCCCGTATCAGTTGAAA
TCATC
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