CX295875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 259 PLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL K+ VVKY FCGGIAN+R+EQ++DR Sbjct: 108 PLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDR 193
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 56/86 (65.12%), Postives = 62/86 (72.09%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 259 PLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL K+ VVKY F GGIAN+R+EQ++DR Sbjct: 108 PLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDR 193
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22 Identity = 55/86 (63.95%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 259 PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK FCGG+ NL Q YDR Sbjct: 99 PLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDR 184
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYD 256 PLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK F GGI+NLRK Q +D Sbjct: 109 PLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFD 193
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 52/85 (61.18%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYD 256 PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK F GIANLR Q YD Sbjct: 107 PLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYD 191
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR------VSYLFWSDI*YIMVLSSKYPNFTGPKYDSKS 352 PLAERVSFL+E IA GPT GG++NATCGN ELIIA+FAL++ K++++K+ GGI N+ KE+ D+ + L + +I L SKY + TG +S S Sbjct: 114 PLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSS 236
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.695e-15 Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRVSYLFWSDI*YIMVLSSKYP 319 PLAER+ + TEQ+A YTGPTVGGLLNAT GNATE+IIAI+AL I VV+ F GGI + K+Q + + + + S + + V+ +P Sbjct: 86 PLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFP 191
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDR 259 PLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL I VV+ FCGG+ +K+Q +D+ Sbjct: 110 PLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDK 195
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRVSYLFWSDI*YIMVLSSKYP 319 PLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL I VV+ FCGG+ +KEQ +D+ + + S + + V+ +P Sbjct: 110 PLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVVNSGLLLMAVMGLLFP 215
BLAST of CX295875 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 2 PLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRVSYLFWSDI*YIMVLSSKYP 319 PLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL I VV+ F GG+ + ++Q +++ S + S + + VL +P Sbjct: 107 PLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFP 212 The following BLAST results are available for this feature:
BLAST of CX295875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295875 ID=CX295875; Name=CX295875; organism=Citrus clementina; type=EST; length=727bpback to top |