CX296277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22 Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 123 MCGGSILGDFFP---RHGGSRVTASDLWPNSPFAATKQLPHNFESTPFSDEHQSLAK---IKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 MCGG+I+ D+ P + G ++TA +LW +A + ++ +Q K +K+ Q E +R+RKN+YRGIR+RPWGKWAAEIRDPRKGVRVWLGTFNTAEE Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEAVKKEQ-----------ATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 113
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20 Identity = 63/162 (38.89%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 123 MCGGSILGDFFPRHGGSRVTASDLWP---NSPFAATKQ---------LPHNFEST----------PFSDEHQSLAKIK--------RPQPPSYLNSC--------------SASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 MCGG+I+ DF P RVT +WP N A+ K+ L +FE+ D+ +K +P +++++ SA EK KR+RKN YRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEE Sbjct: 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEE 162
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.811e-19 Identity = 55/118 (46.61%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 123 MCGGSILGDFFPRHGGSRVTASDLWPNSPFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 MCGG+I+ DF +W S ES P + S++ K+ +P S +E+ KR+RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+E Sbjct: 1 MCGGAIISDF-------------IWSKS------------ESEP--SQLGSVSSRKKRKPVSV-------SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADE 84
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.795e-19 Identity = 61/159 (38.36%), Postives = 74/159 (46.54%), Query Frame = 3 Query: 123 MCGGSILGDFFPRHGGSRVTASDLWPN----------------------SPFAATKQLPHNFESTPFSDEHQS---LAKIKR---PQPPSYLNSCSASGD-------------EKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 MCGG+I+ DF P RVT+ +WP+ + F A Q + S D+ A +K P S +A G EK R+RKN YRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEE Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEE 159
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.924e-18 Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 279 AKIKRPQPPSYLNSCSASGDE----KKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 A KR L++ + +G + K KR+RKN +RGIRQRPWGKWAAEIRDPRKGVRVWLGTFN+AEE Sbjct: 85 AAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEE 154
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 258 SDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 SD ++++ PS ++ S+S ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF+TAEE Sbjct: 32 SDVSDFVSELTGQPIPSSIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEE 104
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 333 GDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 G K+++ + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEE Sbjct: 12 GSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEE 59
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.066e-14 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 3 Query: 336 DEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 D+ +P+R+ YRG+RQRPWGKWAAEIRDP+K RVWLGTF TAEE Sbjct: 30 DQDQPRRRH---YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEE 73
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.765e-13 Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 210 FAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 FA +++ N + E + + R + S + + G + + ++ +KN YRG+RQRPWGK+AAEIRDP++ RVWLGTF TAE+ Sbjct: 87 FAPNQRIEKNHQQ-----EEEITSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAED 170
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.305e-13 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3 Query: 294 PQP----PSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 PQP + C +S ++PK+ YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE Sbjct: 36 PQPLITGSAVTKECESSMSLERPKK-----YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAE 94 The following BLAST results are available for this feature:
BLAST of CX296277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296277 ID=CX296277; Name=CX296277; organism=Citrus clementina; type=EST; length=478bpback to top |