CX296291

Overview
NameCX296291
Unique NameCX296291
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length227
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12136 contig Ccv1_Contig12136:757..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296291 vs. ExPASy Swiss-Prot
Match: FAT2_SCHPO (Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces pombe GN=SPCC1827.03c PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.308e-14
Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 3 
Query:   48 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILS 227
            +FSA +FW++ I+Y ATWYTAVPTIHQI+L     KP    P++RFIRSCS+ LAP +LS
Sbjct:  236 KFSAHSFWKEFIQYGATWYTAVPTIHQILLRTPPPKP---LPRIRFIRSCSSPLAPPVLS 292
The following BLAST results are available for this feature:
BLAST of CX296291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FAT2_SCHPO4.308e-1460.00Putative peroxisomal-coenzyme A synthetase OS=Schi... [more]
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Properties
Property NameValue
Genbank descriptionC05138D11SK FerrChloL1 Citrus clementina cDNA clone C05138D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296291 ID=CX296291; Name=CX296291; organism=Citrus clementina; type=EST; length=227bp
ACGAGGCTTTTGCAGCGGGAGCCGCTGTCACTCTTCCAGCCGCTGGCAGA
TTCTCGGCTTCAACATTTTGGCAGGACATGATTAAATACAACGCAACGTG
GTACACCGCGGTCCCCACCATCCACCAAATCGTCCTTGACCGCCACGTGG
CAAAACCGGAACCAGTTTACCCAAAGCTCCGTTTTATTCGGAGCTGCAGT
GCCTCGTTGGCGCCGGTTATATTGTCT
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