CX296316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296316 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.482e-44 Identity = 97/141 (68.79%), Postives = 104/141 (73.76%), Query Frame = -3 Query: 287 LDEIYGKFDKGSEKKKGYVLPRSKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXPYAKTARRMSLLAEAQRVXXXXXXXXXXXKPITKEEAAAIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 709 LD IYG FDK SEKK GYVLPRSKMVNADLARIINSDEVQSVV PI+ KRA PYAKTARRMSLLAEA+RV KPI+KEEA+ IK+AGKAWYQTMISDSDYTEF+NF+KWLGVSQ Sbjct: 268 LDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSDEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408
BLAST of CX296316 vs. ExPASy Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 92/141 (65.25%), Postives = 104/141 (73.76%), Query Frame = -3 Query: 287 LDEIYGKFDKGSEKKKGYVLPRSKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXPYAKTARRMSLLAEAQRVXXXXXXXXXXXKPITKEEAAAIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 709 L+ IYG F+K SEKKKGYVLPR+KMVNADLARIINSDE+QSVV PIK + KRA PYAKTA+RMSLLAEAQRV K +TKEEA AIK+AGK+WY+TMISDSDYTEF+NF+KWLG SQ Sbjct: 266 LESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406
BLAST of CX296316 vs. ExPASy Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42 Identity = 94/141 (66.67%), Postives = 102/141 (72.34%), Query Frame = -3 Query: 287 LDEIYGKFDKGSEKKKGYVLPRSKMVNADLARIINSDEVQSVVRPIKTEVKRAXXXXXXXXXXXXXXXXXPYAKTARRMSLLAEAQRVXXXXXXXXXXXKPITKEEAAAIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 709 L+ IYG F+K SEKKKGYVLPR+KMVNADLARIINSDEVQSVV PIK KRA PYAKTA+RMSLLAEA RV K +TKEEA AIK+AGKAWYQTMISDSDYTEF+NF+KWLG SQ Sbjct: 267 LESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407 The following BLAST results are available for this feature:
BLAST of CX296316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296316 ID=CX296316; Name=CX296316; organism=Citrus clementina; type=EST; length=711bpback to top |