CX296320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.180e-26 Identity = 48/90 (53.33%), Postives = 69/90 (76.67%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L+EA+ TDGKAA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W + E ATL F+V TGYKF+P + NPY Sbjct: 416 FPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPY 505
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.112e-25 Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICY+YFTR++ L+ +++ W + E +TLAF+V TGYKF+P +NPY Sbjct: 415 FPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPY 504
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.112e-25 Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L++A+ TDGK AVNL KL LFR YY++VICYIYFTR++ L + +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 420 FPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDNPY 509
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.013e-25 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L++A+ TDGK AVNL +L LFR YY++VICYIYFTR++ L+ +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 441 FPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 530
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.196e-24 Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L++A+ TDGK A+NL KL LFR YY++VICYIYFTR++ L +++ W + E +TLAF+V TGYKF+P NPY Sbjct: 448 FPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 537
BLAST of CX296320 vs. ExPASy Swiss-Prot
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 3 Query: 45 FPIVWSIKNLREAARTDGK------------------------------------------------AAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVAGELATLAFYVFTGYKFKPEAHNPY 314 FP+VWSI++L+EA+ TDGK AA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W + E ATL F+V TGYKF+P + NPY Sbjct: 417 FPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPY 554 The following BLAST results are available for this feature:
BLAST of CX296320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296320 ID=CX296320; Name=CX296320; organism=Citrus clementina; type=EST; length=411bpback to top |