CX296363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296363 vs. ExPASy Swiss-Prot
Match: PSBY_ARATH (Photosystem II core complex proteins psbY, chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 59/159 (37.11%), Postives = 75/159 (47.17%), Query Frame = 3 Query: 207 SPLSMQNLPKGLTVSSKPT----DSSSLAAGTAIAGAIFSTLSSCDXXXXXXXXXXXXXG----DNRGXXXXXXXXXXXXWVLFNILQPALNQINRMRSTKGVIIXXXXXXXXXXXXMSMPPHXXXXXXXXXXXXXXXXDSRGQLLLIVVTPAILWVLY 659 SP +QN K S PT + S TA+AGA+FS+LS + DNRG WVL+NILQPA+NQ+N+MR +KG+++ + PP DSRGQLLLIVVTPA+LWVLY Sbjct: 17 SPPKLQNQTKSKPFISLPTPPKPNVSLAVTSTALAGAVFSSLSYSEPALAIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESKGIVVGLGIGGGLAASGLLTPP---PEAYAAAEAAAASSDSRGQLLLIVVTPALLWVLY 172
BLAST of CX296363 vs. ExPASy Swiss-Prot
Match: PSBY_SPIOL (Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 64/180 (35.56%), Postives = 78/180 (43.33%), Query Frame = 3 Query: 135 VLNAKCFXXXXXXXXXXXGATKPTS-PLSMQNLPKGLTVSSKPTDSSSLAAGTAIAGAIFSTLSSCDXXXXXXXXXXXXX----GDNRGXXXXXXXXXXXXWVLFNILQPALNQINRMRSTKGVIIXXXXXXXXXXXXMSMPPHXXXXXXXXXXXXXXXXDSRGQLLLIVVTPAILWVLY 659 VLN KC + KPTS P+S+ P GL+ S P S + AIAGA+F+TL S D DNRG WVLFNILQPALNQIN+MR+ K I + + D+RG LLL+VV PAI WVL+ Sbjct: 11 VLNTKCLTLNTNKTTST--SPKPTSKPISLS--PLGLSNSKLPMGLSPIITAPAIAGAVFATLGSVDPAFAVQQLADIAAEAGTSDNRGLALLLPIIPALGWVLFNILQPALNQINKMRNEKKAFIVGLGLSGLATSGLLLAT---PEAQAASEEIARGSDNRGTLLLLVVLPAIGWVLF 183 The following BLAST results are available for this feature:
BLAST of CX296363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296363 ID=CX296363; Name=CX296363; organism=Citrus clementina; type=EST; length=695bpback to top |