CX296367

Overview
NameCX296367
Unique NameCX296367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length647
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14747 contig Ccv1_Contig14747:164..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296367 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.673e-13
Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:  400 DDNRVAVDEVDFFSDDKNRVSISDHREDDRNKTTNSVHIKKENSHDQLRHRTGLDVNTGLHLLTAANTGSDQSTVDDGVSSD 645
            DD+RV VDEVDFFS+ ++RVS  +  +DD     N V IK E S  +   R+  DVN GL+LLT ANTGSD+STVDDG+S D
Sbjct:   24 DDHRVVVDEVDFFSEKRDRVSRENINDDD--DEGNKVLIKMEGSRVEENDRS-RDVNIGLNLLT-ANTGSDESTVDDGLSMD 101
The following BLAST results are available for this feature:
BLAST of CX296367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRK31_ARATH2.673e-1356.10Probable WRKY transcription factor 31 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionC05139F12SK FerrChloL1 Citrus clementina cDNA clone C05139F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296367 ID=CX296367; Name=CX296367; organism=Citrus clementina; type=EST; length=647bp
CTCAGCTATTGGAGTTTGCCAGGACAGTGGACCCTGCACTATCAAACTAT
GATGCAGAAGGCGCATGGCCTTATCTTATTGATGAATTCGTTGAATACTT
GACTGAGAATGGCATTGTTCAAAATCGATGATGAGCCACGCTGGTGGGTT
AATTATGCTACAAAGTGATAACATCTTTCTCTAGTGTGATTGTAGTCGTG
CTCCCCTGTCAATGAAATTTGTTTGTTTCGGAAAATAATGACTTCCCCAA
AAAACACTTGTTTGTTCATGACCTTATTTATCTGTTGACAATTGGGTATT
CAACATTCTCAGTCAATGGGATTGTTGATGATGATATTTGCATTTCTAGT
GAAATTAATTATTTGCATAAAAAAAAAAAAAAAAAAAAAAAACTCGTCTG
ATGATAATCGGGTGGCTGTTGATGAAGTTGACTTCTTTTCCGATGACAAG
AACAGGGTTTCTATCTCTGATCATCGTGAAGATGATCGTAACAAGACAAC
AAATTCTGTTCACATCAAGAAAGAGAATTCTCACGACCAACTTCGTCACA
GAACTGGCTTGGATGTTAATACTGGCTTGCATCTACTTACTGCTGCTAAC
ACTGGAAGCGATCAATCCACGGTTGATGATGGGGTTTCATCTGATCA
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