CX296381

Overview
NameCX296381
Unique NameCX296381
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:723..1346. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 318.931 bits (816), Expect = 1.280e-86
Identity = 152/207 (73.43%), Postives = 175/207 (84.54%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQ-PDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG+MPKDL+IYVTTASNAQESS+GTYCPGM+PSPP EYITCLGDLYSVAWMEDSETHNLK+ETI QQY  VK RTSN+N Y+ GSHVMEYGN S+KSEKLYLYQGFDPA+ N P N+L    ++GVVNQRDADLLF+WHMY+ + +GS KK + LK++TET RHRKHLDAS+++I  ILFGP     +LN V   GLPLVD
Sbjct:  212 ESGSIFEGIMPKDLNIYVTTASNAQESSYGTYCPGMNPSPPSEYITCLGDLYSVAWMEDSETHNLKKETIKQQYHTVKMRTSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLPLNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPT--MNVLNLVREPGLPLVD 416          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.198e-84
Identity = 144/207 (69.57%), Postives = 177/207 (85.51%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGS+FEG+MPKDL+IYVTTASNAQE+S+GTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE HNLKRE++ QQY++VK+RTSNFNNY  GSHVM+YG+T++ +EKLYLYQGFDPA+ NFPP N     +M VVNQRDA+L  +W MY+ +   SE K+++LKQI ET++HRKH+D S+++IGV+L+GP KGS +L SV A G  LVD
Sbjct:  221 ESGSVFEGIMPKDLNIYVTTASNAQENSWGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSEAHNLKRESVKQQYKSVKQRTSNFNNYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFPPQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVD 427          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.015e-83
Identity = 144/207 (69.57%), Postives = 177/207 (85.51%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG+MPKDL+IYVTTASNAQE+SFGTYCPGM+P PP EY+TCLGDLYSV+WMEDSETHNLKRET+ QQYQ+V++RTSN N+Y  GSHVM+YG+T++ +EKLYLY GFDPA+ NFPP N     +M VVNQRDA+LLFMW MY+ +    EKK+ +L+QITET++HR HLD S+++IGV+L+GP K S +L+SV A GLPLVD
Sbjct:  201 ESGSIFEGIMPKDLNIYVTTASNAQENSFGTYCPGMNPPPPEEYVTCLGDLYSVSWMEDSETHNLKRETVQQQYQSVRKRTSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGNLEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVD 407          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.260e-83
Identity = 144/207 (69.57%), Postives = 173/207 (83.57%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQPD-QMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG+MPKD+DIYVTTASNAQESS+GTYCPGM+PSPPPE+ TCLGDLYSVAWMEDSE+HNLK+ET+ QQY +VK RTSN+N Y +GSHVM+YGN S+K++KLYL+QGFDPAS NFPPN    +  M VVNQRDA+L FMW +YK +  GSEKK E+L+QI + ++HR HLD+S+ +IG +LFGP K S IL SV   G PLVD
Sbjct:  223 ESGSIFEGIMPKDVDIYVTTASNAQESSWGTYCPGMEPSPPPEFTTCLGDLYSVAWMEDSESHNLKKETVKQQYSSVKARTSNYNTYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFPPNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVD 429          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.240e-81
Identity = 141/207 (68.12%), Postives = 174/207 (84.06%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPP-NKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG+MPKDL+IYVTTASNAQE+S+GTYCPGM P PPPEYITCLGDLYSVAWMEDSE+HNLK+E++ QQYQ+VK+RTSNF  Y  GSHVM+YG+ ++ +EKLYLY GFDPA+ NFPP N     +M VVNQRDA+LLFMW +Y+ +    EKK+++LKQI E ++HRKHLD S+++IGV+L+GP+K S +L SV   GLPLVD
Sbjct:  219 ESGSIFEGIMPKDLNIYVTTASNAQENSWGTYCPGMYPPPPPEYITCLGDLYSVAWMEDSESHNLKKESVEQQYQSVKQRTSNFEAYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFPPHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVD 425          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 3.393e-63
Identity = 119/209 (56.94%), Postives = 150/209 (71.77%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANF---PPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG++P+ L+IY TTASNA+ESS+GTYCPG +PSPPPEY TCLGDLYSVAWMEDS  HNL+ ET+ QQY+ VK RT+    Y+ GSHVM+YG+  +  + L LY G +PA+ NF     N L+P    V NQRDADL+  W  Y+ A EGS +K+E  KQ+ E M HR H+D S+ ++G ILFG  +G  +LN V + G PLVD
Sbjct:  220 ESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEEPSPPPEYETCLGDLYSVAWMEDSGMHNLQTETLHQQYELVKRRTAPV-GYSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSR-VTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVD 426          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.751e-62
Identity = 118/209 (56.46%), Postives = 150/209 (71.77%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANF---PPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG++ + L+IY TTASNA+ESS+GTYCPG  P PPPEY TCLGDLYS+AWMEDS+ HNL+ ET+ QQY+ VK RT+++N+Y  GSHVM+YG+  +    L+ Y G +PA+ N+     N L+P     VNQRDADLL  W  Y+ A EG+ +K+E  KQ  E M HR H+D SI +IG +LFG +KG  ILN+V   G PLVD
Sbjct:  221 ESGSIFEGLLLEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASK-AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVD 426          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.432e-61
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASAN--FPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG++P+D+++Y TTASNA ESS+GTYCPG DPSPPPEY TCLGDLYSVAWMEDS+ HNL+ ET+ QQY+ VKERT +   Y  GSHVM+YG+  +  + L+ Y G DPA+ N  F            VNQRDADL+  W  ++ A EGS KK+E  KQ+ E M HR H+D S++++G +LFG +K   +LN+V   G  LVD
Sbjct:  210 ESGSIFEGLLPEDINVYATTASNADESSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTETLHQQYKLVKERTISGGLY-YGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVD 416          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.176e-61
Identity = 119/209 (56.94%), Postives = 151/209 (72.25%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFP---PNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG++P+ L+IY TTASNA+ESS+GTYCPG DPSPP EY TCLGDLYSVAW+EDSE HNL+ ET+ +QY+ VK+RT+  +  + GSHVME+G+  +  EKL L+ G +PA  NF     N ++P    V NQRDADL+  WH Y+ A EGS +K E  KQ+ E M HR H+D SI +IG++LFG + G  +LN V   G PLVD
Sbjct:  205 ESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEDPSPPSEYETCLGDLYSVAWIEDSEKHNLQTETLHEQYELVKKRTAG-SGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSR-VTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVD 410          
BLAST of CX296381 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.927e-58
Identity = 115/212 (54.25%), Postives = 145/212 (68.40%), Query Frame = 3
Query:    6 ESGSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASAN-----FPPNKLQ-PDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVD 623
            ESGSIFEG++P DL+IY TTASNA+ESS+G YCPG  P PPPEY TCLGDLYS+AWMEDSE HNL+ E++ QQY+ VK RT    +   GSHVMEYG+  +    LY Y G +PA+ N        N L+       VNQRDADL+  W  ++ A EGS +K+E  KQ+ E M HRKH+D S+ +IG +LFG +KG+ +L+ V   G PLVD
Sbjct:  217 ESGSIFEGLLPDDLNIYATTASNAEESSWGYYCPGDKPPPPPEYSTCLGDLYSIAWMEDSEVHNLQTESLQQQYKLVKNRTI---SEPYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVD 425          
The following BLAST results are available for this feature:
BLAST of CX296381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VPEB_ARATH1.280e-8673.43Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPE_SOYBN1.198e-8469.57Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
LEGU_CANEN1.015e-8369.57Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_RICCO2.260e-8369.57Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE2_PHAVU1.240e-8168.12Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH3.393e-6356.94Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_CITSI3.751e-6256.46Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU2.432e-6155.29Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH3.176e-6156.94Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_VICSA1.927e-5854.25Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC05139H07SK FerrChloL1 Citrus clementina cDNA clone C05139H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296381 ID=CX296381; Name=CX296381; organism=Citrus clementina; type=EST; length=624bp
GAGGTGAAAGTGGTAGCATTTTTGAAGGTGTAATGCCCAAAGATCTAGAT
ATATATGTCACTACTGCATCAAATGCACAAGAGAGCAGCTTTGGGACTTA
TTGCCCTGGAATGGATCCTTCTCCACCTCCAGAGTACATCACTTGCTTGG
GGGATTTGTACAGTGTTGCTTGGATGGAGGACAGTGAGACTCACAATTTG
AAGAGAGAGACCATAAGTCAACAGTATCAAGCTGTGAAGGAACGGACTTC
CAATTTTAACAATTACAATTCTGGATCTCATGTGATGGAATATGGGAACA
CAAGCGTCAAATCAGAGAAGCTATACTTGTATCAAGGTTTCGATCCTGCC
AGCGCCAACTTTCCTCCGAACAAGCTTCAGCCTGATCAAATGGGAGTTGT
CAACCAGAGAGACGCAGATCTTCTCTTCATGTGGCATATGTACAAAAATG
CAGCAGAGGGATCAGAAAAGAAATCAGAAATGCTTAAGCAGATTACAGAG
ACAATGAGGCACAGAAAACACTTAGATGCAAGTATTGATATGATTGGAGT
AATTTTATTTGGACCAGATAAGGGTTCTAGAATTCTTAATTCCGTTGGAG
CACGTGGCCTGCCTCTTGTTGATG
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