CX296399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.247e-50 Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = -3 Query: 270 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIAXXXXXXXXXXXXXXXVKPWD 674 TGENPDE+TLDRLISTGESE FLQKAIQEQGRGR+LDTINEIQERHDAVK +EKNL+ELHQVFLDMAVLV+ QG QLDDIES V RA+S++RGGT++LQTAR YQ +TRKWTCIA +KPW+ Sbjct: 176 TGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTCIAIIILIIIITVVVLAVLKPWN 310
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.385e-46 Identity = 96/135 (71.11%), Postives = 104/135 (77.04%), Query Frame = -3 Query: 270 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIAXXXXXXXXXXXXXXXVKPWD 674 TGE PDE TL+RLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVK +EK+L ELHQVFLDMAVLV+ QG QLDDIE V+RANS VR G +RL AR YQ +TRKWTC A VKPW+ Sbjct: 175 TGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRANSLVRSGADRLVKARFYQKNTRKWTCFAILLLLIIVVLIVVFTVKPWE 309
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.724e-42 Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = -3 Query: 330 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIA 674 TGE DE+T++ LIS+GESE FLQKAIQEQGRG+ILDTI+EIQERHDAVK +EKNL ELHQVFLDMA LV++QG+QL+DIES V +A+S+VR GT++LQ AR+YQ S+RKWTC A Sbjct: 165 TGEQADEQTIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTCYA 279
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.252e-42 Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = -3 Query: 330 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIA 674 TGE DE+T+D LI++GESE FLQKAIQEQGRG+ILDTI+EIQERHDAVK +EKNL ELHQVFLDMA LV+AQG+QL++IES V +A+S+VR GT++LQ AR+YQ S+RKWTC A Sbjct: 160 TGEKADEQTIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYA 274
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.412e-36 Identity = 72/115 (62.61%), Postives = 95/115 (82.61%), Query Frame = -3 Query: 330 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIA 674 TG+ DE+T+++LIS+GESE FLQKAIQEQGRG+++DT++EIQERHD VK +E++L ELHQVFLDMA LV+AQG L+DIES V +A+S+V GT++L A+ Q + RKW CIA Sbjct: 168 TGQKADEETVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNVSKASSFVMRGTDQLHGAKVLQRNNRKWACIA 282
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.759e-35 Identity = 75/134 (55.97%), Postives = 90/134 (67.16%), Query Frame = -3 Query: 273 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIAXXXXXXXXXXXXXXXVKPW 674 TGE DE T+D LI TG SE QKAIQEQGRG+++DT+ EIQERHDAV+ LEK L +L Q+FLDMAVLV AQGE LD+IESQV A +V+ G LQ A+ Q ++RKW CIA +KPW Sbjct: 166 TGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMCIAIIILLIVVAVIVVGVLKPW 299
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.120e-33 Identity = 74/134 (55.22%), Postives = 91/134 (67.91%), Query Frame = -3 Query: 273 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCIAXXXXXXXXXXXXXXXVKPW 674 TG+ DE+ +DRLI TG+SE QKAI+EQGRG+I+DT+ EIQERHDAV+ LEK L +L QVFLDMAVLV AQGE LD+IE+ V A +V+ G +L A K Q S+RKW CIA +KPW Sbjct: 167 TGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQKSSRKWMCIAILILLIIIIITVISVLKPW 300
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.386e-28 Identity = 58/115 (50.43%), Postives = 88/115 (76.52%), Query Frame = -3 Query: 333 TGENPDEKTLDRLISTGES-ETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKWTCI 674 TGE+ +++ ++++I+ E FL +AIQE G+G++L+T+ EIQ+R+DA K +EK+L ELHQVFLDMAV+V++QGEQ+D+IE V A+ YV G L+TA+ +Q ++RKW CI Sbjct: 173 TGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHVINASHYVADGANELKTAKSHQRNSRKWMCI 287
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: SY112_ARATH (Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.621e-16 Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = -3 Query: 342 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRKW 674 TGE P + ++++IS S + L K + + + + +ERH+AV ++++L LHQVFLDMAVLV+ QG+++DDIE+ V A S+V GGT L A + + T+ W Sbjct: 177 TGEEPSNEDMEKMISGSGSCSDLVKTFEVKPEMDL-----KTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRIDDIEANVANAGSFVSGGTNSLYYANQMKKKTKSW 282
BLAST of CX296399 vs. ExPASy Swiss-Prot
Match: STX1A_DROME (Syntaxin-1A OS=Drosophila melanogaster GN=Syx1A PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14 Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 345 TGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTARKYQLSTRK 674 TG ++ L++++ G S F Q I E + + T+ +I+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV+ T+ + A KYQ R+ Sbjct: 159 TGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAK--QTLADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSKARR 266 The following BLAST results are available for this feature:
BLAST of CX296399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296399 ID=CX296399; Name=CX296399; organism=Citrus clementina; type=EST; length=676bpback to top |