CX296417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.044e-32 Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRA+VYDDEVRK I+GVGV+SI K LVNSKE PTFEQP+MT+EK Sbjct: 309 REDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEK 392
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.767e-32 Identity = 65/84 (77.38%), Postives = 74/84 (88.10%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRA+VY DEVRK +S VGV++I K LVNSKE P+FEQP+MT++K Sbjct: 309 REDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDK 392
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.465e-30 Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRA+VYDDEVRK +S VGV++I K LVNSKE PTFEQP+MT++K Sbjct: 309 REDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDK 392
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.499e-30 Identity = 61/84 (72.62%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + +GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRA+VYDDEVRK +S GVE+I K LVNS+E P FEQP+MT+EK Sbjct: 300 RDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEK 383
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.262e-30 Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRA+VYDDEVRK + +GVE+I K LVNS+E PTF+QP+MT+EK Sbjct: 296 REDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 379
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.566e-30 Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + +GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRA+VYDDEVRK ISGVGV++ K LVNSKE PTF+QP+M+++K Sbjct: 311 RDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDK 394
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.240e-29 Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR D V + DIV+LVD PGQSIDFFGALRA+VYDDEVRK ISGVGV+S+ K LVNSKE PTF+QP+MT++K Sbjct: 313 REDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDK 396
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.763e-29 Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRA+VYDDEVRK GVGVE I ++LVNSKE+ PTF+QP+MT+EK Sbjct: 306 REDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEK 389
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.608e-29 Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRA+VYDDEVRK +SG G+E I + L+NS++ PTFEQP+MT+EK Sbjct: 308 REDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEK 391
BLAST of CX296417 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.154e-29 Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 15 RHEGIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRAKVYDDEVRKCISGVGVESIDKSLVNSKEAAPTFEQPRMTMEK 266 R + IGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRA+VYDDEVRK +SG G+E+I L+NS + PTFEQP+MT+EK Sbjct: 313 REDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEK 396 The following BLAST results are available for this feature:
BLAST of CX296417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296417 ID=CX296417; Name=CX296417; organism=Citrus clementina; type=EST; length=267bpback to top |