CX296429

Overview
NameCX296429
Unique NameCX296429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length213
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX296429 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.716e-21
Identity = 52/71 (73.24%), Postives = 54/71 (76.06%), Query Frame = 1 
Query:    1 KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLI 213
            KIPLPP              RRYAIDA+IVRIMKSRKVLGHQQLV ECVEQL RMFKPD KAIKKR+EDLI
Sbjct:  649 KIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLI 719
The following BLAST results are available for this feature:
BLAST of CX296429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CUL1_ARATH2.716e-2173.24Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC05140G12SK FerrChloL1 Citrus clementina cDNA clone C05140G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296429 ID=CX296429; Name=CX296429; organism=Citrus clementina; type=EST; length=213bp
AAGATTCCTCTCCCTCCTGTGGATGAGAAAAAGAAGGTTATTGAAGATGT
TGATAAGGACAGACGATATGCCATTGATGCCTCAATTGTGCGCATTATGA
AAAGTCGGAAAGTTTTGGGGCACCAACAATTGGTATTGGAGTGTGTCGAG
CAGTTGGGCCGCATGTTCAAGCCTGATTTCAAGGCAATCAAAAAGAGGAT
TGAAGATCTTATC
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