CX296440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296440 vs. ExPASy Swiss-Prot
Match: PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 8.906e-54 Identity = 113/174 (64.94%), Postives = 129/174 (74.14%), Query Frame = -2 Query: 89 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESRGTDGRRXXXXXXXXXXXXXXXXXXXXXXAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 598 MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V + G++GRR GVIDEYLERSK NKELND+KRLATSGANFARA+TVQFG+CKFPENFTGCQDLAKQKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVDGSNGRRSAMVFLAATLFSTAAVSASANA-GVIDEYLERSKTNKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
BLAST of CX296440 vs. ExPASy Swiss-Prot
Match: PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.604e-40 Identity = 72/84 (85.71%), Postives = 82/84 (97.62%), Query Frame = -2 Query: 89 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 340 + DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKVPFISDDLE+EC+GK+K+KCGSNVFWKW Sbjct: 29 IFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112
BLAST of CX296440 vs. ExPASy Swiss-Prot
Match: PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare GN=PSAN PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.130e-39 Identity = 72/84 (85.71%), Postives = 80/84 (95.24%), Query Frame = -2 Query: 89 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 340 V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+CKFP NFTGCQDLAKQKKVPFI+DDLE+EC+GK+K+KCGSNVFWKW Sbjct: 62 VFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
BLAST of CX296440 vs. ExPASy Swiss-Prot
Match: PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri GN=PSAN PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = -2 Query: 107 GVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGS 343 GV+++ L +S ANK LN++KRLATS AN AR+ TV GTC+FPENF GC++LA K V +I++DL++EC+GKD CGS Sbjct: 54 GVVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132 The following BLAST results are available for this feature:
BLAST of CX296440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296440 ID=CX296440; Name=CX296440; organism=Citrus clementina; type=EST; length=641bpback to top |