CX296454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS2_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic OS=Vicia faba GN=AGPP PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 2.913e-61 Identity = 114/122 (93.44%), Postives = 121/122 (99.18%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKG VPIGIGKNSHI+RAIIDKNARIGD+VKI+NSD+VQEAARET+GYFIKSGIVT+IKDALIPSGT+I Sbjct: 391 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGGVPIGIGKNSHIRRAIIDKNARIGDDVKIINSDNVQEAARETEGYFIKSGIVTVIKDALIPSGTVI 512
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_BRANA (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus GN=AGPS1 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 3.220e-60 Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSV+GLRSCISEGAIIEDTLLMGADYYETDADR LAAKGS+PIGIG++SHIKRAIIDKNARIGDNVKI+N+D+VQEAARETDGYFIKSGIVT+IKDALIPSGT+I Sbjct: 399 DSVIGEGCVIKNCKIHHSVIGLRSCISEGAIIEDTLLMGADYYETDADRTLLAAKGSIPIGIGRDSHIKRAIIDKNARIGDNVKIINTDNVQEAARETDGYFIKSGIVTVIKDALIPSGTVI 520
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS1_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic OS=Vicia faba GN=AGPC PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 112/122 (91.80%), Postives = 121/122 (99.18%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKI HSVVGLRSCISEGAIIEDTLLMGADYYET+AD+RFLAAKGSVPIGIGKNSHIKRAI+DKNARIG+NVKI+NSD+VQEAARET+GYFIKSGIVTIIKDALIPSGT++ Sbjct: 387 DSVIGEGCVIKNCKIFHSVVGLRSCISEGAIIEDTLLMGADYYETEADKRFLAAKGSVPIGIGKNSHIKRAIVDKNARIGENVKIINSDNVQEAARETEGYFIKSGIVTIIKDALIPSGTVL 508
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_SOLTU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 5.493e-60 Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIED+LLMGADYYETDADR+ LAAKGSVPIGIGKN HIKRAIIDKNARIGDNVKI+N D+VQEAARETDGYFIKSGIVT+IKDALIPSG II Sbjct: 400 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 521
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_WHEAT (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-S PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.767e-58 Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYET+AD++ LA KG +PIGIGKNSHIKRAIIDKNARIGDNV I+N D+VQEAARETDGYFIKSGIVT+IKDAL+PSGT+I Sbjct: 352 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETEADKKLLAEKGGIPIGIGKNSHIKRAIIDKNARIGDNVMIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 473
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_HORVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.767e-58 Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYET+AD++ LA KG +PIGIGKNSHIKRAIIDKNARIGDNV I+N D+VQEAARETDGYFIKSGIVT+IKDAL+PSGT+I Sbjct: 392 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETEADKKLLAEKGGIPIGIGKNSHIKRAIIDKNARIGDNVMIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 513
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_ARATH (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 2.308e-58 Identity = 109/122 (89.34%), Postives = 118/122 (96.72%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIED+LLMGADYYET ++ L+AKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI+NSD+VQEAARETDGYFIKSGIVT+IKDALIP+GT+I Sbjct: 399 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETATEKSLLSAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPTGTVI 520
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_SOLLC (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.496e-57 Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIED+LLMGADYYETDA+R+ LAAKGSVPIGIGKN KRAIIDKNARIGDNVKI+N D+VQEAARETDGYFIKSGIVT+IKDALIPSG +I Sbjct: 400 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDAERKLLAAKGSVPIGIGKNCLYKRAIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIVI 521
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_ORYSJ (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4) HSP 1 Score: 220.32 bits (560), Expect = 2.552e-57 Identity = 105/122 (86.07%), Postives = 116/122 (95.08%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIED+LLMGADYYET+AD++ L KG +PIGIGKN HI+RAIIDKNARIGDNVKI+N D+VQEAARETDGYFIKSGIVT+IKDAL+PSGT+I Sbjct: 393 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLGEKGGIPIGIGKNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 514
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_MAIZE (Glucose-1-phosphate adenylyltransferase small subunit (Fragment) OS=Zea mays GN=GLG1 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 3.684e-56 Identity = 105/123 (85.37%), Postives = 117/123 (95.12%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY-ETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY ET+AD++ LA G +PIGIGKNSHI++AIIDKNARIGDNVKI+N+D+VQEAARETDGYFIK GIVT+IKDAL+PSGT+I Sbjct: 3 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYAETEADKKLLAENGGIPIGIGKNSHIRKAIIDKNARIGDNVKILNADNVQEAARETDGYFIKGGIVTVIKDALLPSGTVI 125 The following BLAST results are available for this feature:
BLAST of CX296454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296454 ID=CX296454; Name=CX296454; organism=Citrus clementina; type=EST; length=429bpback to top |