CX296484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.249e-22 Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+ IM DKD ESKMVMPGDRVK+VVELI+PVACEQGMRF+IREGGKTVGAGVIQSIIE Sbjct: 421 KVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU1_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.543e-22 Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+SIM DKD ES MV+PGDRVKMVVELI+PVACEQGMRF+IREGGKTVGAGVIQSIIE Sbjct: 421 KVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+SI TDK ESKMVMPGDRV +VVELIMPVACEQGMRF+IREGGKTVGAGVIQ IIE Sbjct: 420 KVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+SI TDK ESKMVMPGDRV +VVELIMPVACEQGMRF+IREGGKTVGAGVIQ IIE Sbjct: 420 KVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.004e-21 Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+ IM+DK ESKMVMPGDRV MVVELIMPVACEQGMRF+IREGGKTVGAGVIQ I+E Sbjct: 427 KVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.045e-20 Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+ IM DKD ESKMVMPGDRVK+VVELI+PVACEQGMRF+IREGGKTVGAGVI +I+E Sbjct: 418 KVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_PEA (Elongation factor Tu, chloroplastic OS=Pisum sativum GN=tufA PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.041e-20 Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 +V+SIM DKD ESKMVMPGDRVK+VVELI+PVA EQGMRF+IREGGKTVGAGVI +IIE Sbjct: 430 KVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE 488
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_OSTTA (Elongation factor Tu, chloroplastic OS=Ostreococcus tauri GN=tufA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16 Identity = 38/59 (64.41%), Postives = 50/59 (84.75%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++ S ++D+ E+ MVMPGDRVKMVVELI P+A E GMRF+IREGG+TVGAGV+ SI++ Sbjct: 351 KIESFISDEGDEATMVMPGDRVKMVVELIQPIAIENGMRFAIREGGRTVGAGVVSSILK 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_NEPOL (Elongation factor Tu, chloroplastic OS=Nephroselmis olivacea GN=tufA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.256e-15 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = -1 Query: 404 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSII 577 ++ S D E+ MVMPGDRVKMVVELI P+A E+GMRF+IREGG+TVGAGV+ +II Sbjct: 352 KIDSFRADDGGEATMVMPGDRVKMVVELIQPIAIEKGMRFAIREGGRTVGAGVVSNII 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAT (Elongation factor Tu, chloroplastic OS=Chlorokybus atmophyticus GN=tufA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.256e-15 Identity = 36/59 (61.02%), Postives = 50/59 (84.75%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++ S D +E++MVMPGDR+KMVV+LI P+A E+GMRF+IREGG+TVGAGV+ +I+E Sbjct: 352 KIESFQADDGSETQMVMPGDRIKMVVQLIQPIAIEKGMRFAIREGGRTVGAGVVFNILE 410 The following BLAST results are available for this feature:
BLAST of CX296484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296484 ID=CX296484; Name=CX296484; organism=Citrus clementina; type=EST; length=577bpback to top |