CX296540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 7.066e-63 Identity = 115/142 (80.99%), Postives = 128/142 (90.14%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFC-QSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 444 +R EGV+S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILTRR LP L EFL +LR FFG+ +YDVKHIMRFC Q LYGGLDRVAR+L+V+RAVGKCHQAGSDSLLTW AFQ++RD+YFV DG EKHAGVLYGLEV+ Sbjct: 137 NRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLYGLEVF 278
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.740e-61 Identity = 110/139 (79.14%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 31 EGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQ-SLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 444 +GV+S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILTRR LP L EF V+RV FG +YDVKH+M+FC+ L+GGLDRVARTL+V+RAVGKCHQAGSDSLLTWHAFQ++RD+YFV DGPEKHAGVLYGLEV+ Sbjct: 142 DGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLYGLEVF 280
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.214e-38 Identity = 79/138 (57.25%), Postives = 108/138 (78.26%), Query Frame = 1 Query: 31 EGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGP-EKHAGVLYGLEV 441 +G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP +F ++ V+F +YD+KH+M+FC SL+GGL+++A L+V R VG CHQAGSDSLLT F+K+++ +FV GP K++GVLYGL V Sbjct: 134 DGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV--GPLHKYSGVLYGLGV 267
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 2.070e-38 Identity = 79/140 (56.43%), Postives = 107/140 (76.43%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 441 + E G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F ++ V+F +YD+KH+M+FC SL+GGL+++A LDV R VG CHQAGSDSLLT F+K+++ +F+ EK++GVLYGL V Sbjct: 132 NNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFI-GSMEKYSGVLYGLGV 268
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 7.867e-38 Identity = 78/138 (56.52%), Postives = 102/138 (73.91%), Query Frame = 1 Query: 28 EEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 441 E+G+D VRF ELMMSSG+V N+++SWVTFH YDFGYLVK+LT + LP +F +L V+F +YD+KH+M FC L+GGL+R+A + V R VG CHQAGSDSLLT +F+K+++ YF EK+ GVLYGL V Sbjct: 133 EKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVLYGLGV 267
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 7.620e-33 Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 435 H EEG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 126 HEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.952e-33 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 435 H EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 126 HEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 9.952e-33 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 435 H EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 126 HEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.952e-33 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 435 H EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 126 HEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX296540 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 9.952e-33 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 22 HREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 435 H EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 126 HEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262 The following BLAST results are available for this feature:
BLAST of CX296540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296540 ID=CX296540; Name=CX296540; organism=Citrus clementina; type=EST; length=476bpback to top |