CX296547

Overview
NameCX296547
Unique NameCX296547
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10351 contig Ccv1_Contig10351:970..1677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 2.977e-96
Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 1
Query:    4 GDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 705
            GDVLIDGE TG+C  GC+AIADSGTSLLAGPT +IT INHAIGA GV+SQ+CK +V QYG+TI+++L++E  P+KICSQ+ LCTFDGTRG SMGIE                  MCS CEM V+WMQN+LR+N+T ++I+NY+N+LCDR+PSP G+SAVDC  LSSMP VSFTIGGK+FDLAP EY+L+VGEG  AQCISGFTAFD+ PPRGPLWILGDVFMGRYHTVFD+G L
Sbjct:  273 GDVLIDGEPTGFCDGGCSAIADSGTSLLAGPTPVITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHD-GMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKL 505          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 6.864e-93
Identity = 160/234 (68.38%), Postives = 190/234 (81.20%), Query Frame = 1
Query:    4 GDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 705
            GDVLI G+TTG+C++GC+AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+V QYG+ IL++L+AETQP KICSQ+GLCTFDG  G S GI+                  MC+ACEMAV+WMQN+L +N+T D ILNY+NQLCD+LPSP GES+VDC +L+SMP +SFTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG +
Sbjct:  269 GDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGP-MCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKM 501          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.171e-92
Identity = 162/234 (69.23%), Postives = 189/234 (80.77%), Query Frame = 1
Query:    4 GDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 705
            GDVL+ G++TG+C+ GC AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+V QYG+ IL++L+AETQP+KICSQ+GLCTFDGTRG S GI                   MCSACEMAV+WMQN+L +N+T D IL+YVNQLC+RLPSP GESAVDC +L SMP++ FTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG L
Sbjct:  268 GDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADP-MCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKL 500          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.340e-88
Identity = 154/234 (65.81%), Postives = 189/234 (80.77%), Query Frame = 1
Query:    4 GDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGNL 705
            GDVLI  +TTG+C++GC AIADSGTSLLAG TTI+TQIN AIGA+GV+SQ+CK+LVDQYGK+++EML++E QP+KICSQM LC+FDG+   SM IE                   C  C   V+WMQN++R+NET + I+NYV++LC+RLPSP GESAVDC +LSSMPN++FT+GGK F+L+P +YVL+VGEG  AQCISGFTA DVAPP GPLWILGDVFMG+YHTVFDYGNL
Sbjct:  235 GDVLIGDKTTGFCASGCAAIADSGTSLLAGTTTIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMR---CVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNL 465          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.098e-82
Identity = 141/232 (60.78%), Postives = 173/232 (74.57%), Query Frame = 1
Query:    4 GDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYG 699
            GD+LIDG +TG+C+ GC AI DSGTSLLAGPT I+ Q+NHAIGA G+IS ECK +V +YG+ IL +LIA+T PQK+CSQ+GLC FDG R  S GIE                 AMCS CEMAV+W++N+LR N+T + ILNY NQLC+RLPSPNGES V C  +S MPN++FTI  K F L P +Y++++ +G    CISGF AFD+ PPRGPLWILGDVFMG YHTVFD+G
Sbjct:  261 GDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGSD------AMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFG 486          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  430 VNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 702
            +N+     P  NGE  VDC  +  +P +SF +GGK FDL   +YVL V +     C+SGF   D+ PP GPLWILGDVF+G+Y+T FD GN
Sbjct:  288 INKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGN 378          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20
Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  412 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 702
            +Q+ NY+      + + NGE  V C  LS MP+V+FTI G  + L P +Y+LE G G    C SGF   D++PP GPLWILGDVF+G+Y++VFD GN
Sbjct:  291 EQLQNYIG-----VTNTNGEYGVSCSTLSLMPSVTFTINGLDYSLTPEQYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGN 379          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  451 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ-CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 702
            +P  NGE  V+C  + S+PN++F +GG+ FDL   +Y+L++  G     C+SGF   D+  P GPLWILGDVF+GR+++VFD+GN
Sbjct:  302 IPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGN 386          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1
Query:  451 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 702
            +P   GE  + C+ +SS+P V   +GGK ++L P++Y+L+V +G    C+SGF   D+ PP GPLWILGDVF+G Y+TVFD  N
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDN 399          
BLAST of CX296547 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  454 PSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFD 693
            P   GE  V+CD + S+P +SFT+GG+V+ L   +Y+L+V +     C+SGF   D+  P GPLWILGDVFMG+Y+TVFD
Sbjct:  305 PLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFD 384          
The following BLAST results are available for this feature:
BLAST of CX296547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
ASPR_CUCPE2.977e-9669.23Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR1_ORYSJ6.864e-9368.38Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU1.171e-9269.23Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA1.340e-8865.81Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ1.098e-8260.78Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPP_AEDAE5.366e-2149.45Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATE_RANCA1.561e-2049.48Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
ASP3_CAEEL5.933e-2048.24Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
CATD_MOUSE1.322e-1948.81Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_CHIHA1.726e-1951.25Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05146A01SK FerrChloL1 Citrus clementina cDNA clone C05146A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296547 ID=CX296547; Name=CX296547; organism=Citrus clementina; type=EST; length=707bp
GAGGGTGATGTCCTGATTGATGGTGAAACAACTGGATATTGTTCCACTGG
TTGTAACGCAATTGCTGATTCTGGAACCTCGTTGTTGGCGGGCCCAACAA
CCATAATTACACAAATTAATCATGCCATTGGAGCTTCTGGTGTCATAAGC
CAAGAATGCAAGACTCTGGTTGACCAATATGGAAAAACCATATTGGAAAT
GCTGATAGCTGAGACACAACCACAAAAGATCTGCTCTCAGATGGGTCTAT
GTACTTTTGATGGGACTCGAGGTTTTAGCATGGGAATTGAGAGTGTCATA
GATAAGAGCTCAGACAAGTCATCTGATGGTGTGCATGACTCTGCTATGTG
CTCTGCTTGTGAGATGGCGGTCATATGGATGCAGAACAAGCTGAGGAGAA
ATGAGACAGCAGATCAAATCTTGAATTATGTAAATCAGCTTTGTGACCGT
CTGCCCAGTCCAAATGGAGAATCAGCTGTTGATTGTGACAATTTATCTTC
CATGCCCAATGTTTCATTTACAATTGGTGGCAAAGTATTTGACCTTGCAC
CGAATGAGTATGTTCTTGAAGTGGGAGAGGGAGTTGCAGCCCAATGCATC
AGTGGATTTACTGCTTTCGATGTGGCCCCTCCTCGTGGTCCTCTCTGGAT
TCTGGGAGATGTTTTCATGGGTCGCTATCACACTGTGTTCGACTACGGCA
ACTTGTC
back to top