CX296551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296551 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 59/87 (67.82%), Postives = 65/87 (74.71%), Query Frame = -2 Query: 438 AEKNMGNTGGVNLFAQAIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWV--XXXXXXXXXXXDATQAGFGFAGNGLPVPSGGFNF 692 AEKN+G+TG +N +AQ IDDAEGLEKIENLQSHDN EIYEKAVKILETYW+ D +QAGF F GN PVPSGGFNF Sbjct: 445 AEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQFGGNQAPVPSGGFNF 531
BLAST of CX296551 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21 Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = -2 Query: 438 AEKNMGNTGGVNLFAQAIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWVXXXXXXXXXXXDATQAGFGFAGNGLPVPSGGFNF 692 A+K++GNT GVN++AQ ID+AEGLEKIENLQSHDNTEIYEKAVKILETYW+ + F F G + +PSGGFNF Sbjct: 446 ADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWL----EEEDVPVSLNEDQFEFGGADISLPSGGFNF 526
BLAST of CX296551 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 55/86 (63.95%), Postives = 61/86 (70.93%), Query Frame = -2 Query: 435 AEKNMGNTGGVNLFAQAIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWVXXXXXXXXXXXDATQAGFGFAGNGLPVPSGGFNFG 692 AEKN+G G VN +AQ IDDAEGLEKIENLQSHDNTEIYEKAVK+LE+YW+ +A Q GF F VPSGGFNFG Sbjct: 451 AEKNLG-AGDVNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDAMPSGDNA-QNGFNFGNQQPNVPSGGFNFG 534
BLAST of CX296551 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.690e-20 Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = -2 Query: 438 AEKNMGNTGGVNLFAQAIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWVXXXXXXXXXXXDATQAGFGFAGNGLPVPSGGFNF 692 AEKN+G+TG NL+AQ ID+AEGLEKIENLQSHDN +IY+KAVKILET+W A Q+GF F VP G FNF Sbjct: 448 AEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEEEGNDENHAPQSGFQFGSTN--VPPGQFNF 530
BLAST of CX296551 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = -2 Query: 540 GGVNLFAQAIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWV 668 G VN+F+Q ID+AEGLEKIENLQSHDN EIYEKAVKILE YW+ Sbjct: 452 GDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWM 494 The following BLAST results are available for this feature:
BLAST of CX296551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296551 ID=CX296551; Name=CX296551; organism=Citrus clementina; type=EST; length=693bpback to top |