CX296573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.772e-16 Identity = 49/103 (47.57%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 371 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGE-QWPSQIADGGWAGGEVQKPIPVVPYFPEAAPAATVPLGGDGW 676 LLARMVLQMRGTIRPG KWDVMVDLFFYR A+DYA +++ + + QWP I D W+ V +PIP VP APA G W Sbjct: 184 LLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQWPGTI-DQSWSDA-VPQPIPAVPGVNWGAPAEAPAAAGGDW 284
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 50/94 (53.19%), Postives = 58/94 (61.70%), Query Frame = -1 Query: 398 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMN-LTSGEQWPSQIADGGWAGGEVQKPIPVVPYFPEAAPAA 676 LLARMVLQMRGTIRPG KWDVMVDLFFYR A DYA A+++++ + S QWP+ I D W V +PIP VP AAP A Sbjct: 180 LLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDGQWPAAI-DQPW-NDAVPQPIPAVPAVNWAAPEA 271
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 50/111 (45.05%), Postives = 59/111 (53.15%), Query Frame = -1 Query: 371 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAI-DYATAEY---SMNLTSGEQWPSQIADGGWAGGEVQ--KPIPVVP--YFPEAAP-AATVPLGGDGW 676 LLARMVLQMR TI PGHKWDVMVDLFFYR A DY +Y ++ G W + I D G +V PIP VP + +AAP + VP+ DGW Sbjct: 177 LLARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGDWGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGW 287
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 48/136 (35.29%), Postives = 54/136 (39.71%), Query Frame = -1 Query: 269 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGEQWPSQIADGGWAGGEVQKPIPVVPYFPEAAPAATVPLGGDGWXXXXXXXXXXXXXXXXXXXXXXXVSAAPQPTGWE 676 LLARMVLQMRG I GHKW+VMVDLFFYR DY + + +QW + I D W G VQ P P P+ GDGW P PTGWE Sbjct: 177 LLARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADYAAAPIGGADQW-NAIPDAQWGGDVVQ---PANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAVGLD-----------VPAPTGWE 297
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11 Identity = 48/107 (44.86%), Postives = 53/107 (49.53%), Query Frame = -1 Query: 371 LLARMVLQMRGTIRPGHKWDVMVDLFFYR-XXXXXXXXXXXXXXAIDYA---TAEYSMNLTSGEQW-PSQIADGGWAGGEVQKPIPVVPYFPEAAPAATVPLGGDGW 676 LLARMVLQMRGTI G KWDVMVDLFFYR +Y EY M G+QW +QI D W GE Q PI P + +A P G GW Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM--VGGDQWTTAQIPDAAWP-GEGQAPISAAPAAASWSDSAAAPADG-GW 283
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 44/104 (42.31%), Postives = 54/104 (51.92%), Query Frame = -1 Query: 380 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSGEQW-PSQIADGGWAGGEVQKPIPVVPYFPEAA----PAATVPLGG 676 LLARMVLQMRGTI KWDVMVDLFFYR + A + + G+QW +QI+D W+ GEV++PI P AA+VP G Sbjct: 182 LLARMVLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGD------EEAEVQADYGMVGGDQWTTAQISDAAWS-GEVEQPISAAPAVGVTVAAGWEAASVPAAG 278
BLAST of CX296573 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11 Identity = 46/101 (45.54%), Postives = 51/101 (50.50%), Query Frame = -1 Query: 398 LLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSM---NLTSGEQW-PSQIADGGWAGGEVQKPIPVVP----YFPEAAPAA 676 LLARMVLQMRGTIRP KWDVMVDLFFYR AE+ + G+QW + I D W GE Q PI P + AAPAA Sbjct: 178 LLARMVLQMRGTIRPAQKWDVMVDLFFYREPEETKPEDEDEVA----PQAEFGLPAPEYGGGDQWTTAAIPDAAWP-GEAQAPISAAPAAGSWNDSAAPAA 273 The following BLAST results are available for this feature:
BLAST of CX296573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296573 ID=CX296573; Name=CX296573; organism=Citrus clementina; type=EST; length=676bpback to top |