CX296580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296580 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15 Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 3 Query: 3 IQWVRDQALGDPWLRDYADL-SKCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGGVQRTESEKRMIDDKLCPLSATDLMWDLSLPKGADRDHEYCNPIASVETNDKIGRLPSC----FVGGREGDPLIDRQKELSKMLEARGVHV 461 ++WV Q P++R D ++ FL G SSGG IA+H +RA D VK+ G +L FGG +RTESE+R+ L D W LP+ ADRDH CNP ++G LP V G D DRQ + L G HV Sbjct: 173 LKWVMSQ----PFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD------EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFG--PNGRRLGGLPFAKSLIIVSGL--DLTCDRQLAYADALREDGHHV 316
BLAST of CX296580 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 3 IQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGGVQRTESEKRMIDDKLCPLSATDLMWDLSLPKGADRDHEYCNP 329 ++WV + WLR D + FL G SSGG I ++ +RA++ S + ++G +L P FGG +RTESEKR+ + D W LP+G DR+H C+P Sbjct: 164 LKWVNSSS----WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE------SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSP 263
BLAST of CX296580 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 3 IQWVRDQALGDPWLRDYADLSK-CFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGGVQRTESEKRMIDDKLCPLSATDLMWDLSLPKGADRDHEYCNP 329 + WV+ + WL+ D + +L G SSGG IA++ +RA + VK++G +L P FGG +RT+SEK + + D W LP+G DRDH CNP Sbjct: 166 LNWVKSRV----WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN------EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNP 265
BLAST of CX296580 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 3 IQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGGVQRTESEKRMIDDKLCPLSATDLMWDLSLPKGADRDHEYCNPIA 335 + WV ++ WL+ D FL G SSGG IA++ LRA + S + ++G +L P FGG +RTESEK + + D W LP+G DR+H CNP + Sbjct: 166 LNWVNSRS----WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE------SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFS 267 The following BLAST results are available for this feature:
BLAST of CX296580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296580 ID=CX296580; Name=CX296580; organism=Citrus clementina; type=EST; length=586bpback to top |