CX296583

Overview
NameCX296583
Unique NameCX296583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 69/89 (77.53%), Postives = 81/89 (91.01%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YPIP  V+TG+R+K  IEKENNFKQPGERYRSWAPDRQERF+ RW+ AL DPRVTHE+RSIW SYWSQAD++LGQK+ASRLNVRP++
Sbjct:  404 EQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E++PIPS V++G+REK  I KENNFKQPGERYRS++ DRQERF+NRWI AL DPRVTHE+RSIW+SYWSQAD+SLGQK+ASRLNVRPSI
Sbjct:  404 EKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 68/89 (76.40%), Postives = 81/89 (91.01%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E+YPIPS + TG+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++ L DPR+T+E+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  397 EKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E +PIP  V TGRREK  IEKENNFKQPGERYRSWA DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQAD+S+GQKLAS LNVRPSI
Sbjct:  404 EMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.063e-36
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER+PIP  + +GRREK  IEKENNFKQPGERYRSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS L+ RP+I
Sbjct:  404 ERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.063e-36
Identity = 68/89 (76.40%), Postives = 81/89 (91.01%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E YPIPS V +G+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++AL DPR+T+E+RSIW++YWSQAD+SLGQKLASRLNVRPSI
Sbjct:  404 EVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.389e-36
Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ERYP P  V +G+RE+  IEKENNFK+PGERYRSW PDRQERF+ RW+ AL D RVTHE+RSIW+SYWSQADRSLGQKLAS LNVRPSI
Sbjct:  404 ERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 67/89 (75.28%), Postives = 82/89 (92.13%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER+PIP  V+TG+R++  IEKENNFKQPGERYR++APDRQERF+ RW+ AL DPRVTHE+RSIW+SYW+QAD+SLGQKLASRLNVRP++
Sbjct:  404 ERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            E++PIP  V +GRREK  IEKENNFKQ GER+RSWAPDRQ+RF+ RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS LN+RP+I
Sbjct:  404 EKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CX296583 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.276e-36
Identity = 64/89 (71.91%), Postives = 81/89 (91.01%), Query Frame = -2
Query:  211 ERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 477
            ER+P P  ++TG+R+K  IEKENNFKQPG+RYRSWAPDRQ+RF+NRW+KAL +PRVTHE+RS W+SY +QADRSLGQK+ASRLN+RP++
Sbjct:  404 ERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492          
The following BLAST results are available for this feature:
BLAST of CX296583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA3_NICPL1.256e-3777.53Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA2_GOSHI2.798e-3778.65Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_NICPL2.798e-3776.40Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA1_GOSHI4.772e-3779.78Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA4_SOYBN1.063e-3675.28Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA2_SOLLC1.063e-3676.40Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA1_CUCPE1.389e-3677.53Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA_SOLAP1.813e-3675.28Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA_PHAAU1.813e-3674.16Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA_IPOBA5.276e-3671.91Catalase OS=Ipomoea batatas PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05146D06SK FerrChloL1 Citrus clementina cDNA clone C05146D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296583 ID=CX296583; Name=CX296583; organism=Citrus clementina; type=EST; length=667bp
GAGGCCTCGTGCCGAATTCGGCACGAGGTTTTATTAATTGAAACAACAGG
AAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAATATACAAC
AGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCAC
TCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGT
GACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGA
CCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAAC
CTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGA
ACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGC
TTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAAT
TACATCAGAAGGAATGGGATATCTCTCCCTCGTGCCGAATTCGGCACGAG
GCCTCGTGCCGAATTCGGCACGAGGGCTGGATTGCTATCTTCATAACTAT
CCAAGCCACCAAGGTTCAAGACCTGGTAGAGACGGTAGAAGAAGAAACAC
CAAGAAGAAGGAAAAAAAAAAAAAAAAAAACCTCGTGCCGAATTCGGCAC
AAGGGGGGGGGCCCGGT
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