CX296589

Overview
NameCX296589
Unique NameCX296589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length199
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14413 contig Ccv1_Contig14413:701..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296589 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.516e-27
Identity = 56/65 (86.15%), Postives = 62/65 (95.38%), Query Frame = 3 
Query:    3 NAYEKLKKRGIPLASNQVNYSLIYRKPEENGVKAACDELGITLIAYCPIAQGALTGKYTPQNPPT 197
            +AYE+LKKRGIPLASNQVNYSLIYR PE+ GVKAACDELG+TLIAY PIAQGALTGKYTP+NPP+
Sbjct:  217 DAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGKYTPENPPS 281
The following BLAST results are available for this feature:
BLAST of CX296589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1669_ARATH1.516e-2786.15Uncharacterized oxidoreductase At1g06690, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionC05146E01SK FerrChloL1 Citrus clementina cDNA clone C05146E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296589 ID=CX296589; Name=CX296589; organism=Citrus clementina; type=EST; length=199bp
GCAATGCTTACGAAAAGCTTAAAAAGAGAGGAATTCCATTAGCTTCAAAC
CAAGTGAACTATAGCCTCATATACAGAAAACCAGAAGAGAATGGTGTGAA
GGCTGCCTGTGATGAACTTGGGATCACTTTAATTGCATATTGTCCTATTG
CTCAAGGTGCTCTCACTGGAAAGTATACACCACAGAATCCACCAACTGG
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