CX296608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 6.011e-74 Identity = 134/150 (89.33%), Postives = 142/150 (94.67%), Query Frame = 1 Query: 7 EFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 +FG+ED++LF +ANL+IERGEK AI+GPNGCGKSTLLKLIMGLEKP GEV+LGEHNVLPNYFEQNQAE LDLDKTVLETV EAAEDWR DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV PSTLLVLDEPTNHLDIPSKE Sbjct: 431 DFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFEQNQAEVLDLDKTVLETVCEAAEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKE 580
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2) HSP 1 Score: 275.789 bits (704), Expect = 6.011e-74 Identity = 134/149 (89.93%), Postives = 141/149 (94.63%), Query Frame = 1 Query: 10 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 FG++D++LFN+ANL IERGEK AIIGPNGCGKSTLLKLIMGLEKP GEV+LGEHNVLPNYFEQNQAEA DLDKTV+ETV EAA DWRIDDIK LLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE Sbjct: 418 FGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVILGEHNVLPNYFEQNQAEAQDLDKTVIETVVEAAVDWRIDDIKALLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 566
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YFMM_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmM OS=Bacillus subtilis GN=yfmM PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.168e-23 Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 GY D L NL +ERG+K A+ G NG GK+TLLK ++G +P G V GEH + YFEQ E + T +E V + +I+ L +C ++ +VS+LSGGEKA++ CK + + LLVLDEPTNHLD +KE Sbjct: 334 GY-DSPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEH-IYTGYFEQEVKETNN--NTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDADAKE 477 HSP 2 Score: 67.0106 bits (162), Expect = 4.241e-11 Identity = 52/187 (27.81%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV---------LLGEHNVLPN-------------------------YFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 441 G+ DR +FN + + +GE +IG NG GKST + +I G +P G+V L +H VL Y + +A+ +L+K +LE V + D ++++I LG + L+R V+ LSGG++ ++ K +++ +L+LDEPTN+LD Sbjct: 12 GFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEK-LLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIG---LERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLD 194
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.831e-23 Identity = 62/142 (43.66%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 31 LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 L + + RGE A++GPNG GKSTLLK ++ KP G + G NV Y++Q QAE L K VL+ + + +I+ LG F D + + V LSGGEKARLA K M++ + L+LDEPTNHLD+ SKE Sbjct: 342 LLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGS-NVSVGYYDQEQAE-LTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKE 481
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UUP1_HAEIN (ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae GN=uup-A PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.307e-23 Identity = 60/148 (40.54%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 25 RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + L + TI RG+K A++GPNGCGK+T +KL++G +P G++ G + YF+Q +A+ LD +KTV++ VA+ +D I+ +K G L F V LSGGE+ RL K ++KP+ LL+LDEPTN LD+ + E Sbjct: 332 KTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIRCGTKLEIA-YFDQYRAD-LDPEKTVMDNVADGKQDIEINGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLE 477
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YBIT_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli (strain K12) GN=ybiT PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.238e-23 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 G+++ LF NL +E GEK A++G NG GKSTLLK ++G +P G V E N Y+ Q+ + D TV E +++ ++ + ++ +LGR F D + + +LSGGEK R+ F K M++ +L++DEPTNHLD+ S E Sbjct: 328 GFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSE-NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIE 475
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YBIT_ECOL6 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O6 GN=ybiT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.238e-23 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 G+++ LF NL +E GEK A++G NG GKSTLLK ++G +P G V E N Y+ Q+ + D TV E +++ ++ + ++ +LGR F D + + +LSGGEK R+ F K M++ +L++DEPTNHLD+ S E Sbjct: 328 GFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSE-NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIE 475
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: YBIT_ECO57 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.238e-23 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 13 GYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 G+++ LF NL +E GEK A++G NG GKSTLLK ++G +P G V E N Y+ Q+ + D TV E +++ ++ + ++ +LGR F D + + +LSGGEK R+ F K M++ +L++DEPTNHLD+ S E Sbjct: 328 GFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSE-NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIE 475
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UUP2_HAEIN (ABC transporter ATP-binding protein uup-2 OS=Haemophilus influenzae GN=uup-B PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.835e-22 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 25 RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 + L + TI RG+K A++GPNGCGK+T +KL++G +P G++ G + YF+Q +A+ LD +K V++ VA+ +D I+ +K G L F V LSGGE+ RL K ++KP+ LL+LDEPTN LD+ + E Sbjct: 144 KTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIRCGTKLEIA-YFDQYRAD-LDPEKIVMDNVADGKQDIEINGVKRHVLGYLQEFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLE 289
BLAST of CX296608 vs. ExPASy Swiss-Prot
Match: UUP_ECOLI (ABC transporter ATP-binding protein uup OS=Escherichia coli (strain K12) GN=uup PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 4.520e-21 Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 61 RGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD----IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 456 RG+K A+IGPNGCGK+TLLKL++G + G + +G + YF+Q++AE LD DKTV++ +AE ++ ++ + G L F V LSGGE+ RL + +KPS LL+LDEPTN LD+ + E Sbjct: 344 RGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVA-YFDQHRAE-LDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLE 477 The following BLAST results are available for this feature:
BLAST of CX296608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296608 ID=CX296608; Name=CX296608; organism=Citrus clementina; type=EST; length=457bpback to top |