CX296622

Overview
NameCX296622
Unique NameCX296622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length665
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.674e-77
Identity = 137/191 (71.73%), Postives = 162/191 (84.82%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG-KSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNIS 665
            LVVG+V+FFYFR++   +KK DDPEGN+WAKSL G KG+KV +F+KS++KM+LSDLMKAT  F K+NII +GRTGTMYK  LEDG+ LM+KRLQDSQRSEKEF AEM TLGSVKNRNLVPLLG+C+A KERLL+Y++M NG LYD LHPAD+   K +DWP RL IAIG A+G AWLHH+CNP IIHRNIS
Sbjct:  241 LVVGVVLFFYFRKLGAVRKKQDDPEGNRWAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNIS 431          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.381e-43
Identity = 94/195 (48.21%), Postives = 123/195 (63.08%), Query Frame = 3
Query:   96 LVVGIVMFF-YFRRMSMRKKKD----DDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNIS 665
            L VG+V+F+ +F R   RKKK        + + W   L   K ++V+LF+K I K++L DLM ATN+FS  NI  S RTG  YKA L DG+ L VKRL      EK+F +EM  LG +++ NLVPLLG+C+ + ERLLVYKHM NG+L+  LH        +DWP R  I +GAA+G AWLHH C P  +H+ IS
Sbjct:  234 LCVGLVIFWWFFIREGSRKKKGYGAGKSKDDSDWIGLLRSHKLVQVTLFQKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFGEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFIS 428          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.164e-41
Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 3
Query:   96 LVVGIVMFFYFRRMSMRKK----------KDDDPEGNKWAKSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNIS 665
            L VG  MF++F     RK           KDD    + W   L   K ++V+LF+K I K++L DL++ATN F   NI+ S R+G  YKA L DG+ L VKRL    + SEK+F +E+  LG +++ NLVPLLGFC+ + E LLVYKHM NG+LY  L   D     +DWP R+ +A+GAARG AWLHH C PL +H+ IS
Sbjct:  227 LCVGFGMFWWFFIRDRRKMNNYGYGAGKCKDD----SDWIGLLRSHKLVQVTLFQKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLSSCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQQWD-----IDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYIS 418          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.329e-39
Identity = 79/155 (50.97%), Postives = 112/155 (72.26%), Query Frame = 3
Query:  201 AKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            A  I ++ FEK + K+  +DL++ATN F  ++++GSG  G +YKA L+DG+ + +K+L   S + ++EF AEM T+G +K+RNLVPLLG+C   +ERLLVY++M  GSL D+LH    TG  ++WP R  IAIGAARG A+LHHNC P IIHR++
Sbjct:  861 ALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDM 1015          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39
Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 3
Query:  162 DPEGNKWAKSLTGAK---GIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            D   N     LTG K    I ++ FEK + K+  +DL++ATN F  +++IGSG  G +YKA+L+DG+ + +K+L   S + ++EF+AEM T+G +K+RNLVPLLG+C    ERLLVY+ M  GSL D+LH     G  ++W  R  IAIG+ARG A+LHHNC+P IIHR++
Sbjct:  840 DRTANNTNWKLTGVKEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDM 1010          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.598e-39
Identity = 78/155 (50.32%), Postives = 111/155 (71.61%), Query Frame = 3
Query:  201 AKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            A  I ++ FEK + K+  +DL++ATN F  ++++GSG  G +YKA L+DG+ + +K+L   S + ++EF AEM T+G +K+RNLVPLLG+C   +ERLLVY++M  GSL D+LH     G  ++WP R  IAIGAARG A+LHHNC P IIHR++
Sbjct:  861 ALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDM 1015          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.003e-36
Identity = 88/206 (42.72%), Postives = 129/206 (62.62%), Query Frame = 3
Query:   99 VVGIVMFFYFRRMSMRK--KKDDDPEGNKWAKS----------LTGAKG-----IKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            ++  V  F  RR +M K  K+ DDPE  + ++           L+G++      I +++FE+ + K+RL D+++AT+ FSK NIIG G  GT+YKA L     + VK+L +++ +  +EF+AEM TLG VK+ NLV LLG+C   +E+LLVY++M NGSL   L       + +DW +RL IA+GAARG A+LHH   P IIHR+I
Sbjct:  839 IIVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDI 1044          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.228e-36
Identity = 85/199 (42.71%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   99 VVGIVMFFYFRRMSMRKKKDDDPE--------GNKWA-KSLTGAKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGK-SVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            +V ++M  Y  R   +K+K  +           + W   S+     I V+ FEK + K+  + L++ATN FS +++IGSG  G +YKA L DG+ + +K+L Q + + ++EF+AEM T+G +K+RNLVPLLG+C   +ERLLVY++M  GSL  +LH     G   +DW  R  IAIGAARG A+LHH+C P IIHR++
Sbjct:  788 IVMLIMALYRARKVQKKEKQREKYIESLPTSGSSSWKLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDM 986          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.893e-34
Identity = 74/154 (48.05%), Postives = 107/154 (69.48%), Query Frame = 3
Query:  210 IKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--GKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            I V+ FEK + K+  + L++ATN FS   ++GSG  G +YKA L DG+ + +K+L + + + ++EF+AEM T+G +K+RNLVPLLG+C   +ERLLVY++M  GSL  +LH       G  ++W  R  IAIGAARG A+LHH+C P IIHR++
Sbjct:  835 INVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDM 988          
BLAST of CX296622 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32
Identity = 71/154 (46.10%), Postives = 107/154 (69.48%), Query Frame = 3
Query:  210 IKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTPLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH--PADDTGKSVDWPRRLXIAIGAARGFAWLHHNCNPLIIHRNI 662
            I V+ F++ + K++ S L++ATN FS  ++IG G  G ++KA L+DG+ + +K+L + S + ++EF+AEM TLG +K+RNLVPLLG+C   +ERLLVY+ M  GSL ++LH     +  + + W  R  IA GAA+G  +LHHNC P IIHR++
Sbjct:  814 INVATFQRQLRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDM 967          
The following BLAST results are available for this feature:
BLAST of CX296622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
Y5838_ARATH4.674e-7771.73Probably inactive leucine-rich repeat receptor-lik... [more]
Y1719_ARATH3.381e-4348.21Probable inactive receptor kinase At1g27190 OS=Ara... [more]
Y1699_ARATH3.164e-4146.77Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE1.329e-3950.97Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_ARATH2.962e-3947.95Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRI1_SOLLC6.598e-3950.32Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
EXS_ARATH4.003e-3642.72Leucine-rich repeat receptor protein kinase EXS OS... [more]
BRL3_ARATH5.228e-3642.71Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRL1_ARATH4.893e-3448.05Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL2_ARATH1.574e-3246.10Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05146H12SK FerrChloL1 Citrus clementina cDNA clone C05146H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296622 ID=CX296622; Name=CX296622; organism=Citrus clementina; type=EST; length=665bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGAACTTCAAGGGCCCTCACACT
GGAGTCATTGCTGGGGCAGCAATTGGCGGGGTGACTTTCGCAGCATTGGT
TGTGGGTATTGTTATGTTCTTCTATTTCCGTAGAATGTCTATGAGGAAGA
AGAAGGATGATGATCCTGAAGGAAACAAATGGGCGAAGAGCTTGACAGGA
GCCAAAGGCATTAAGGTTTCCTTGTTTGAGAAGTCAATTACTAAAATGAG
ATTAAGTGATCTCATGAAGGCTACCAACAGCTTCAGCAAAAACAATATTA
TTGGGTCAGGAAGAACTGGGACAATGTACAAAGCATTGCTTGAAGATGGC
ACGCCACTTATGGTAAAGAGGTTGCAGGATTCACAACGTTCTGAGAAAGA
ATTTGTGGCTGAGATGGCTACTCTGGGAAGTGTGAAAAATCGTAACTTAG
TTCCGCTTTTAGGTTTTTGCATGGCTAAGAAGGAGAGGCTTTTGGTTTAC
AAGCACATGCCAAATGGTAGCCTTTATGATCTTTTACATCCCGCTGATGA
CACTGGCAAGAGTGTGGATTGGCCACGGAGGCTCNAAATAGCTATAGGGG
CAGCTAGAGGATTTGCCTGGCTACATCATAACTGCAATCCTCTTATTATT
CACCGAAATATTAGC
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