CX296631

Overview
NameCX296631
Unique NameCX296631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.178e-80
Identity = 136/152 (89.47%), Postives = 147/152 (96.71%), Query Frame = -1
Query:  233 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 688
            QDH+Y+VSTRHYRAPEVILG+GWNYPCDLWS+GCIL+ELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRRGA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KAREAL HPFFTR
Sbjct:  294 QDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFFTR 445          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68
Identity = 119/152 (78.29%), Postives = 138/152 (90.79%), Query Frame = -1
Query:  233 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 688
            QD +Y+VSTRHYRAPEVILGLGW+YPCD+WSVGCI++ELC+GEALFQTHENLEHLAMMERVLGP P  M+ + DR +EKY RRG RLDWPDGATSRDS++AV KL RL NLIMQHVDHSAG+LI+++QGLLR+DP+ER+ AREALRHPFF R
Sbjct:  275 QDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRRG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRHPFFAR 425          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.519e-57
Identity = 102/148 (68.92%), Postives = 121/148 (81.76%), Query Frame = -1
Query:  239 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 682
            H  +V TRHYR+PEVILGLGW+Y CDLWS+GCIL ELC+GEALFQTH+NLEHLAMMER LGPLP HM  +A R AEKYFRRG RL+WP+GA SR+S+RAV +L RL +++ +HVD++     DLL GLL YDP+ERL A EAL HPFF
Sbjct:  249 HHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 5.426e-39
Identity = 75/152 (49.34%), Postives = 107/152 (70.39%), Query Frame = -1
Query:  227 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 682
            HS VVSTRHYRAPE+ILGLGW+YPCD+WS+GCIL+EL +G+ALFQTHE+ EHL MME++LGP   +M+ R+ R ++++F+   ++ +P   T + S+  +  L  L  +        A  L+DLL+ +  YDP  R+ A+EAL HPFFT+ +
Sbjct:  536 HSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEVA-LLLDLLKKVFVYDPKRRITAKEALWHPFFTQPI 686          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.280e-37
Identity = 80/152 (52.63%), Postives = 104/152 (68.42%), Query Frame = -1
Query:  233 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R   K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:  336 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRENCKPLR-RYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK2_MOUSE (Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37
Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R   K LR   L  +  DH    L DL++ +L Y+PA+RL   EAL+HPFF
Sbjct:  335 EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPVPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRENCKPLR-RYLTSEAEDHH--QLFDLIENMLEYEPAKRLTLGEALQHPFF 478          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37
Identity = 79/150 (52.67%), Postives = 105/150 (70.00%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCILIE   G  +F TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K L+   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct:  334 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRRCKPLK-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35
Identity = 76/150 (50.67%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCILIE   G  +FQTH++ EHLAMMER+LGP+P HM+ +  +R  KYF    +LDW + +++   +R   K L+    ++ H D     L DL++ +L YDPA R+   EAL+HPFF
Sbjct:  332 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKR--KYFHHN-QLDWDEHSSAGRYVRRRCKPLK--EFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPFF 475          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.134e-35
Identity = 75/150 (50.00%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCILIE   G  +FQTH++ EHLAMMER+LGP+P HM+ +  +R  KYF    +LDW + +++   +R   K L+    ++ H D     L DL++ +L YDP +R+   EAL+HPFF
Sbjct:  332 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRKR--KYFHHN-QLDWDEHSSAGRYVRRRCKPLK--EFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475          
BLAST of CX296631 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35
Identity = 75/150 (50.00%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  239 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 688
            + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCILIE   G  +F TH++ EHLAMMER+LGPLP HM+ +  +R  +YF    RLDW + +++   +    K L+   ++ Q  +H    L DL+  +L YDPA+R+  +EAL+HPFF
Sbjct:  333 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSREHLAMMERILGPLPKHMIQKTRKR--RYFHHD-RLDWDEHSSAGRYVSRRCKPLK-EFMLSQDAEHEF--LFDLVGKILEYDPAKRITLKEALKHPFF 476          
The following BLAST results are available for this feature:
BLAST of CX296631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
AFC1_ARATH2.178e-8089.47Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC2_ARATH3.261e-6878.29Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC3_ARATH1.519e-5768.92Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
LKH1_SCHPO5.426e-3949.34Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK2_HUMAN2.280e-3752.63Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
CLK2_MOUSE3.889e-3753.33Dual specificity protein kinase CLK2 OS=Mus muscul... [more]
CLK1_HUMAN3.889e-3752.67Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
CLK4_MOUSE2.134e-3550.67Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
CLK4_HUMAN2.134e-3550.00Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK1_MOUSE6.208e-3550.00Dual specificity protein kinase CLK1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC05801A10SK FerrChloL1 Citrus clementina cDNA clone C05801A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296631 ID=CX296631; Name=CX296631; organism=Citrus clementina; type=EST; length=688bp
TTTTGGGGGATACCTTCAATTACCATTATAGTGCCGAAAGAAACGAAACA
AGACAGGTGGGTGCAGAAACATAAATTTTACTATACAAACAGCAATGTAT
AAAAAAGAGACAATAGAATATCATTCACCACGTGCATGGCTGTGTATTAT
TTCTTTTCTAAAATTGAACAAGCTCGTCAATAGCAAAGACGAGGCTTTGC
AATTACAAGGGAAAGCCACACCTTCTCACATCTCTCGTGAAGAAAGGATG
TCTTAGGGCTTCCCTGGCTTTGAGCCGCTCTGCTGGATCATATCGGAGGA
GCCCCTGAAGGAGATCAATCAAATCACCGGCAGAGTGATCTACATGCTGC
ATTATCAGGTTCGGGAGACGGAGAAGTTTCCAAACTGCCCTCATGCTATC
TCTCGAAGTTGCACCATCAGGCCAATCCAGTCGTGCACCTCTCCTAAAAT
ATTTCTCAGCACGGCGGTCAGCTCTTATCACCATATGGTGGGGGAGAGGC
CCTAAAACCCTCTCCATCATGGCAAGATGCTCTAAATTCTCGTGCGTTTG
AAAAAGAGCCTCGCCGGAGCAAAGTTCTATAAGAATGCAACCCACACTCC
ACAAATCACAAGGATAATTCCATCCAAGGCCTAAAATAACCTCTGGTGCA
CGATAATGTCGTGTTGATACAACATAGCTGTGATCCTG
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