CX296636

Overview
NameCX296636
Unique NameCX296636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14483 contig Ccv1_Contig14483:20..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.799e-33
Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            + ELNNG KMP +GLGTW++  G V          GYRHIDCA  Y NEKE+G  L++  ++ V+KR+DL+I SKLWC  H    V  A  +TL DLQ+DY+DLYL+HWP   K G  +  L+    + P   D   TW AME L D G
Sbjct:    4 HLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDKSMVKGAFQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33
Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            + ELNNG KMP +GLGTW++  G V          GYRHIDCA  Y NEKE+G  L++  ++ V+KR+DL+I SKLWC  H    V  A  +TL DLQ+DY+DLYL+HWP   K G  +  L+    + P   D   TW AME L D G
Sbjct:    4 HLELNNGTKMPTLGLGTWKSPPGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.927e-33
Identity = 72/153 (47.06%), Postives = 98/153 (64.05%), Query Frame = 2
Query:  128 NVQYFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKK-LFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPDI---PSTWKAMEALYDSG 568
            +V+Y  L  G KMP IGLGTW++  G V          GYRHIDCA+ YGNE E+G  +K+ +  D  +KRE++++TSKLW   H P+DV  A+ +TLQ+LQ+DY+DLYL+HWP   K+G      NP+  +Q D+     TWKAME L + G
Sbjct:    4 SVEYETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVFPQNPDGSVQYDLTDYKDTWKAMEKLVEKG 156          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: YDG7_SCHPO (Uncharacterized oxidoreductase C26F1.07 OS=Schizosaccharomyces pombe GN=SPAC26F1.07 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.786e-32
Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 2
Query:   95 ITREMDQIANDNVQYFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG---FISLNPEDLL--QPDIPSTWKAMEALYDSG 568
            ++ E     N    +F L +G+K+P +GLGTW+++              GYRHID A  YGNE E+G  +K   E GV  R+D+W+TSKLWC  HAPE VPKA+++TL+DL++DY+D YL+HWPV  K G   F      +L+  +  I  TWKAME L ++G
Sbjct:    1 MSAEQKYFENAQNVHFTLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESGV-PRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETG 159          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.786e-32
Identity = 71/152 (46.71%), Postives = 95/152 (62.50%), Query Frame = 2
Query:  131 VQYFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKK-LFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPDI---PSTWKAMEALYDSG 568
            V+Y  L  G K+P IGLGTW++  G V          GYRHIDCA+ YGNE E+G  +K+ +  D  + RE++++TSKLW   H P+DV  A+ +TLQDLQ+DY+DLYL+HWP   K+G      NP+  +Q D+     TWKAME L   G
Sbjct:    5 VEYETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIFPQNPDGSVQYDLTDYKDTWKAMEKLVKQG 156          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31
Identity = 69/146 (47.26%), Postives = 89/146 (60.96%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            LNNGAKMP +GLGTW++  G V          GYRHIDCA+ Y NE E+G  +++   + V+KRE+L+I SKLWC  H    V  A  +TL DL++DY+DLYL+HWP   K G  F  L+    + P   +I  TW AME L D G
Sbjct:    7 LNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 2.199e-31
Identity = 68/146 (46.58%), Postives = 89/146 (60.96%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            L NGAKMP +GLGTW++  G V          GYRHIDCA+ Y NE E+G  L++  ++ V+KRE+L+I SKLWC  H    V  A  +TL DL++DY+DLYL+HWP   K G  +  L+    + P   D   TW+AME L D G
Sbjct:    7 LYNGAKMPILGLGTWKSPPGQVTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWPTGFKHGSEYFPLDAAGNVIPSDTDFLDTWEAMEGLVDEG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.872e-31
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            L  GAKMP +GLGTW++  G V          GYRHIDCA+ Y NE E+G  L+   ++ V+KREDL+I SKLWC  H  + V  A  +TL DL++DY+DLYL+HWP   K G  F  L+ +  + P   D   TW AME L D G
Sbjct:    6 LYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKDFFPLDEDGNVIPSEKDFVDTWTAMEELVDEG 151          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 6.397e-31
Identity = 69/146 (47.26%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  146 LNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQP---DIPSTWKAMEALYDSG 568
            L  GAKMP +GLGTW++  G V          GYRHIDCA+ Y NE E+G  L++  +  V+KREDL+I SKLWC DH    V  A   TL+DL++DY+DLYL+HWP   K G     L+ +  + P   D   TW+AME L D G
Sbjct:    7 LYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDESDFVETWEAMEELVDEG 152          
BLAST of CX296636 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.091e-30
Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 2
Query:  137 YFELNNGAKMPPIGLGTWQAQHGVVXXXXXXXXXXGYRHIDCAYFYGNEKEIGTELKKLF-EDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQ---PDIPSTWKAMEALYDSG 568
            +  L NG K+P IGLGTW+++ G V          GYRH+DCA  Y NE EIG   ++    + VIKREDL++TSKLW   H PEDV  A+ +TL DL++DY+DLYL+HWP   ++G      NP+  ++    D   TWKAME L + G
Sbjct:    7 FVALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLFPKNPDGTMRYDYTDYKDTWKAMEKLVEKG 156          
The following BLAST results are available for this feature:
BLAST of CX296636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ALDR_MOUSE1.799e-3347.65Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
ALDR_RAT2.349e-3347.65Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
AK1A1_XENLA8.927e-3347.06Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
YDG7_SCHPO5.786e-3244.17Uncharacterized oxidoreductase C26F1.07 OS=Schizos... [more]
AK1A1_XENTR5.786e-3246.71Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
ALDR_HUMAN1.289e-3147.26Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
ALDR_RABIT2.199e-3146.58Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDR_BOVIN2.872e-3147.26Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]
ALDR_PIG6.397e-3147.26Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1A1_CHICK1.091e-3046.00Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05801B03SK FerrChloL1 Citrus clementina cDNA clone C05801B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296636 ID=CX296636; Name=CX296636; organism=Citrus clementina; type=EST; length=568bp
GAGGAATTTCTGCCATCTCCCCGCAAATTCAATCTCATCTCTCCACAAAT
TAAAAGGCCAGTGATCACTCACTGCCCCTGGTCATTTCACACACATAACT
CGGGAAATGGACCAAATAGCAAACGATAACGTTCAATACTTCGAGTTGAA
CAATGGAGCCAAAATGCCGCCTATCGGATTAGGCACATGGCAGGCTCAAC
ATGGTGTTGTTGCCGAAGCCATTGCTATTGCCATCAAGGCTGGATACCGT
CATATCGATTGTGCTTATTTCTATGGCAATGAAAAGGAGATTGGTACCGA
GCTGAAGAAACTGTTTGAAGATGGAGTGATCAAGCGTGAGGATCTATGGA
TCACCTCCAAGCTCTGGTGTTGTGATCATGCACCAGAAGATGTACCAAAG
GCAATGGACAGAACTTTGCAGGACTTGCAGATTGATTACGTGGATTTGTA
CCTCGTGCACTGGCCAGTGCGAACGAAGAAGGGATTTATAAGCCTCAATC
CCGAAGACCTTCTTCAACCAGATATACCAAGCACATGGAAAGCAATGGAG
GCACTTTATGATTCTGGC
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