CX296683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_SOLTU (Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 4.423e-48 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = -1 Query: 68 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 346 AIMDTQAVVDAC+SGHIAGYSGDVW PQPAPKDHPWRYMPNQAMTPH+SGTTIDAQLRYAAG KDMLDRYFKGEDFP +NYIVK GELAPQYR Sbjct: 289 AIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR 381
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_HORVU (Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.140e-46 Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = -1 Query: 68 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 346 AIMDTQAV DACSSGHIAGY GDVW PQPAPKDHPWRYMPN AMTPH+SGTTIDAQLRYAAGVKDMLDRYFKGE+FPV+NYIVK GELA QY+ Sbjct: 285 AIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEEFPVENYIVKEGELASQYK 377
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 2.055e-45 Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = -1 Query: 68 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 346 AIMDTQAV DACSSG +AGY GDVW PQPAPKDHPWRYMPN AMTPH+SGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVK G+LA QY+ Sbjct: 284 AIMDTQAVADACSSGQVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKEGQLASQYQ 376
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH2_ORYSJ (Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486900 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.505e-45 Identity = 81/93 (87.10%), Postives = 85/93 (91.40%), Query Frame = -1 Query: 68 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 346 AIMDTQAV DAC+SGH+AGY GDVW PQPAPKDHPWRYMPN AMTPH SGTTID QLRYAAGVKDMLDRYFKGEDFP QNYIVKAG+LA QY+ Sbjct: 286 AIMDTQAVADACASGHVAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHCSGTTIDGQLRYAAGVKDMLDRYFKGEDFPAQNYIVKAGQLASQYQ 378
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.020e-44 Identity = 81/93 (87.10%), Postives = 85/93 (91.40%), Query Frame = -1 Query: 68 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR 346 AIM+ QAVVDA SGHI GYSGDVW+PQPAPKDHPWRYMPNQAMTPH SGTTIDAQLRYAAG KDML+RYFKGEDFP +NYIVK GELAPQYR Sbjct: 292 AIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPTENYIVKDGELAPQYR 384
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_PSESR (Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 7.598e-24 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = -1 Query: 80 IMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELA 343 + D AV A SG +AGY+GDVW PQPAPKDHPWR MP MTPH+SGTT+ AQ RYAAG +++L+ +F+G + IV+ G LA Sbjct: 288 LCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALA 375
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.341e-20 Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = -1 Query: 80 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDMLDRYF-KGEDFPVQNYIVKAGELA 346 AI + V +A SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++DAQ RYA GVK++L+ YF K D+ Q+ IV+ G A Sbjct: 274 AICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLDAQKRYAQGVKNILNSYFSKKFDYRPQDIIVQNGSYA 368
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_EMENI (Probable formate dehydrogenase OS=Emericella nidulans GN=aciA PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 2.988e-20 Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = -1 Query: 80 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN-----QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELA 346 AI+ + V +A SGH+ GY GDVW PQPAPK+HP RY + A PH+SGT+IDAQ+RYA G K +LD YF G D+ Q+ IV G+ A Sbjct: 273 AIVVKEDVAEALKSGHLRGYGGDVWFPQPAPKEHPLRYAEHPWGGGNATVPHMSGTSIDAQIRYANGTKAILDSYFSGRFDYQPQDLIVHGGDYA 367
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH2_YEAST (Formate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=FDH2 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.693e-20 Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = -1 Query: 80 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQ-----AMTPHVSGTTIDAQLRYAAGVKDMLDRYF-KGEDFPVQNYIVKAGELA 346 AI + V +A SG +AGY GDVW+ QPAPKDHPWR M N+ AMT H+SGT++ AQ RYA GVK++L+ YF K D+ Q+ IV+ G A Sbjct: 274 AICVAEDVAEAVKSGKLAGYGGDVWDKQPAPKDHPWRTMDNKDHVGNAMTVHISGTSLHAQKRYAQGVKNILNSYFSKKFDYRPQDIIVQNGSYA 368
BLAST of CX296683 vs. ExPASy Swiss-Prot
Match: FDH_NEUCR (Formate dehydrogenase OS=Neurospora crassa GN=fdh PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.135e-19 Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = -1 Query: 80 AIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPN-----QAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELA 346 AI+ + V +A SGH+ GY GDVW PQPAP+DHP RY N AM PH+SGT++DAQ RYAAG K +++ Y G+ D+ ++ IV G+ A Sbjct: 261 AIVVKEDVAEALKSGHLRGYGGDVWFPQPAPQDHPLRYAKNPFGGGNAMVPHMSGTSLDAQKRYAAGTKAIIESYLSGKHDYRPEDLIVYGGDYA 355 The following BLAST results are available for this feature:
BLAST of CX296683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296683 ID=CX296683; Name=CX296683; organism=Citrus clementina; type=EST; length=346bpback to top |