CX296685

Overview
NameCX296685
Unique NameCX296685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length338
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296685 vs. ExPASy Swiss-Prot
Match: MCFX_DICDI (Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.348e-11
Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 3
Query:   21 IASKEGFKDLYAVYGSYLLRNLPFDAIQFCIYDHLQIIYKAAARADLNDPKNAIIGAFAGAMTGAITTPLDVINTRVMAHGSENRP--TGLFDCVQTIVREKGPPAL 335
            + S+ G K LY    S LLR++PF  I F IY  ++         ++  PK  + G  AG++  +++TP DVI TR+      N P   G+ DC +  ++ +GP AL
Sbjct:  162 VVSELGIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTDQETGEIGLPKILLCGITAGSIAASVSTPFDVIKTRIQVKPGPNDPHYKGIADCFRKTIQSEGPKAL 268          
BLAST of CX296685 vs. ExPASy Swiss-Prot
Match: YM39_YEAST (Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae GN=YMR166C PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.459e-11
Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 3
Query:    6 DAYRFIASKEGFKDLYAVYGSYLLRNLPFDAIQFCIYDHL-QIIYKAAAR----ADLNDPKNAIIGAFAGAMTGAITTPLDVINTRVMAHGSENRPTGLFDCVQTIVREKGPPAL 335
            +A + +  +EGF+ L+  Y + L R+LPF A+QF  Y+   Q+ +K   +     +L+ P   + GA AG + G ITTP+DV+ TRV      ++    +      V    P AL
Sbjct:  198 NAIKTVIKEEGFRSLFFGYKATLARDLPFSALQFAFYEKFRQLAFKIEQKDGRDGELSIPNEILTGACAGGLAGIITTPMDVVKTRVQTQQPPSQSNKSYSVTHPHVTNGRPAAL 312          
The following BLAST results are available for this feature:
BLAST of CX296685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MCFX_DICDI3.348e-1133.64Mitochondrial substrate carrier family protein X O... [more]
YM39_YEAST7.459e-1132.17Uncharacterized mitochondrial carrier YMR166C OS=S... [more]
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Properties
Property NameValue
Genbank descriptionC05801F09SK FerrChloL1 Citrus clementina cDNA clone C05801F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296685 ID=CX296685; Name=CX296685; organism=Citrus clementina; type=EST; length=338bp
CTCCTGATGCATACCGGTTTATTGCTTCGAAGGAAGGATTTAAGGATCTT
TATGCGGTATATGGATCTTATCTATTGCGGAATTTGCCCTTTGATGCAAT
TCAATTCTGCATCTACGATCACCTTCAGATCATCTATAAGGCTGCTGCTC
GTGCAGATTTGAATGATCCCAAAAATGCTATCATCGGGGCTTTTGCTGGG
GCGATGACCGGGGCTATAACTACTCCTCTGGATGTGATTAATACAAGGGT
AATGGCTCATGGATCAGAAAACCGACCCACAGGACTCTTTGATTGTGTTC
AAACTATTGTTAGAGAAAAAGGACCTCCTGCTCTTCTC
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