CX296733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.385e-26 Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = -1 Query: 133 GKAAQQMNVPVPEGCTDPTAENFDPTSRSDDGSCQYS 243 GK AQQ+N+PVPEGCTDP AENFDPT+RSDDG+C Y+ Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYN 473 HSP 2 Score: 67.3958 bits (163), Expect = 2.385e-26 Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 GNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYG Sbjct: 397 GNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.845e-26 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 G M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 397 GGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 66.6254 bits (161), Expect = 6.845e-26 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = -1 Query: 136 GGKAAQQM-NVPVPEGCTDPTAENFDPTSRSDDGSCQY 246 GG+AAQQ+ NVPVPEGCTDP A N+DPT+RSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.637e-25 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 GNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI G F+G Sbjct: 395 GNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 66.2402 bits (160), Expect = 5.637e-25 Identity = 27/38 (71.05%), Postives = 35/38 (92.11%), Query Frame = -1 Query: 130 GKAAQQMNVPVPEGCTDPTAENFDPTSRSDDGSCQYSL 243 GKAAQQ+++PV +GCTDP A+N+DPT+RSDDGSC Y+L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.036e-24 Identity = 30/41 (73.17%), Postives = 40/41 (97.56%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 G M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG Sbjct: 388 GYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 63.5438 bits (153), Expect = 6.036e-24 Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = -1 Query: 133 GKAAQQM-NVPVPEGCTDPTAENFDPTSRSDDGSCQYS 243 G+ AQQ N+PVPEGCTDP A+NFDPT+RSDDGSC Y+ Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.731e-23 Identity = 29/41 (70.73%), Postives = 39/41 (95.12%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 G+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYG Sbjct: 387 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 62.3882 bits (150), Expect = 1.731e-23 Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = -1 Query: 133 GKAAQQMNVPVPEGCTDPTAENFDPTSRSDDGSCQYS 243 GK AQQ +PVPEGCTD A+N+DPT+RSDDGSC Y+ Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.639e-13 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 GNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG Sbjct: 397 GNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = -3 Query: 284 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 403 GNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+ Sbjct: 401 GNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.023e-12 Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = -3 Query: 284 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 403 GNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+ Sbjct: 399 GNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.023e-12 Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = -3 Query: 281 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 403 G+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYG Sbjct: 384 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of CX296733 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.997e-11 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = -3 Query: 287 GNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 403 GNM+VQEQENVKRVQLA+ YL EAALG+ANADAI +GNF Sbjct: 401 GNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439 The following BLAST results are available for this feature:
BLAST of CX296733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296733 ID=CX296733; Name=CX296733; organism=Citrus clementina; type=EST; length=405bpback to top |