CX296771

Overview
NameCX296771
Unique NameCX296771
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5617 contig Ccv1_Contig5617:940..1675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44
Identity = 88/132 (66.67%), Postives = 103/132 (78.03%), Query Frame = -1
Query:  329 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAP-EPMLACKKLXXXXXXXXXXXXXXVMLIQL 721
            AEALTSDHRPSR+DE++RIE+ GGYVD  +  WR+QGSLAVSR +GD HLKQWII+EPE  I+RI P++EFLILASDGLWDKVSNQEA+DIARPFC+  D   +P+LACKKL              VMLIQL
Sbjct:  245 AEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKGTDQKRKPLLACKKLVDLSVSRGSLDDISVMLIQL 376          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.127e-43
Identity = 79/135 (58.52%), Postives = 103/135 (76.30%), Query Frame = -1
Query:  317 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQLGRYL 721
            AEALTSDH PS+ +E  RIE +GGYVD C+G WR+QG+LAVSR +GDR+LK+W+IAEPET+ +RIKPE+EFLILASDGLWDKV+NQEA+D+ RP+C  ++ P  + ACKKL              +++IQL  +L
Sbjct:  255 AEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVRPYCVGVENPMTLSACKKLAELSVKRGSLDDISLIIIQLQNFL 389          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.647e-42
Identity = 84/136 (61.76%), Postives = 102/136 (75.00%), Query Frame = -1
Query:  317 LAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQLGRYL 724
            +A+AL+SDHRPSR+DE+ RIET GGYVD  HG WR+QGSLAVSR +GD  LK+W+IAEPETKI RI+ ++EFLILASDGLWDKVSNQEA+DIARP C   + P  + ACKKL              VMLI L +++
Sbjct:  261 VAKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIARPLCLGTEKPLLLAACKKLVDLSASRGSSDDISVMLIPLRQFI 396          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.835e-36
Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = -1
Query:  320 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQLGRY 721
            AEALTSDHR SREDE+ RIE +GG+V    GTWRVQGSLAVSR +GD HLKQW++++P+T  + +  + EFLILASDGLWDKV NQEA+DIARP   S D    M AC++L              +++IQL ++
Sbjct:  256 AEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLYISNDKASRMTACRRLVETAVTRGSTDDISIVIIQLQQF 389          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 59/90 (65.56%), Postives = 76/90 (84.44%), Query Frame = -1
Query:  455 LAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAI 724
            +AEALT DH+P R+DEK RIE+ GGYVD   G WRVQG LAVSR++GD HLK+W++AEPET+++ ++ + EFL+LASDGLWD VSNQEA+
Sbjct:  241 VAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAV 330          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C53_ARATH (Putative protein phosphatase 2C 53 OS=Arabidopsis thaliana GN=At4g08260 PE=5 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.536e-26
Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = -1
Query:  317 WRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQLGRYL 625
            WR+QGSL V R +GD  LK+W+IAEPETKI R++ ++EFLILAS GLWDKVSNQEA+DIARPFC   + P  + ACKKL              VMLI L +++
Sbjct:  110 WRIQGSLVVPRGIGDAQLKKWVIAEPETKISRVEHDHEFLILASHGLWDKVSNQEAVDIARPFCLRTEKPLLLAACKKLVDLSASRGSFDDISVMLIPLRQFV 212          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = -1
Query:  317 AEALTSDHRPSREDEKSRIETMGGYVDL-CHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIK-PEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQLGRYL 721
            A ALTSDH P+R+DE+SRIE+ GGYV    +G WRVQ  LAV+R+ GD  LK+W++AEPE     +     EFL++ASDGLW+KVSNQEA+D       S+D      +C++L              VM++ L R+L
Sbjct:  265 AAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQEAVDAVAAGHYSVD------SCRRLVDMARRRGSRDDVTVMVVDLKRFL 395          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  389 AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKL 721
            A A++ DH+P + DE+ RIE  GG+V +  GTWRV G LAVSRA GD+ LKQ+++A+PE K   +    EFLILASDGLWD VSN+EA+D+ RP        +P  A K+L
Sbjct:  205 AIAVSRDHKPDQSDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPI------QDPEQAAKRL 308          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.613e-23
Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = -1
Query:  452 LAEALTSDHRPSREDEKSRIETMGGYVDLC-HGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYE--FLILASDGLWDKVSNQEAID 724
            +A ALTSDH P REDE+ RIE+ GGYV     G WRVQ SLAVSRA GD  +KQW+  EPET  + +  + +  FL+LASDGLW KVSNQEA+D
Sbjct:  280 VATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVD 373          
BLAST of CX296771 vs. ExPASy Swiss-Prot
Match: P2C45_ARATH (Putative protein phosphatase 2C-like protein 45 OS=Arabidopsis thaliana GN=At3g27140 PE=5 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = -1
Query:  329 QGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXVMLIQL 616
            +GSL V R +GD  LK+W+IAEPETKI R++ ++EFLILAS GLWDKVSNQEA+DIARPFC   + P  + ACKKL              VMLI L
Sbjct:   93 KGSLVVPRGIGDAQLKKWVIAEPETKISRVEHDHEFLILASHGLWDKVSNQEAVDIARPFCLRTEKPLLLAACKKLVDLSASRGSFDDISVMLIPL 188          
The following BLAST results are available for this feature:
BLAST of CX296771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
P2C02_ARATH3.693e-4466.67Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C30_ARATH3.127e-4358.52Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C25_ARATH2.647e-4261.76Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C32_ORYSJ4.835e-3655.22Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C14_ARATH2.745e-3165.56Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C53_ARATH4.536e-2656.31Putative protein phosphatase 2C 53 OS=Arabidopsis ... [more]
P2C74_ORYSJ1.906e-2445.99Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
P2C10_ORYSJ1.235e-2352.25Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C77_ORYSJ1.613e-2360.64Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C45_ARATH4.694e-2357.29Putative protein phosphatase 2C-like protein 45 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05802F05SK FerrChloL1 Citrus clementina cDNA clone C05802F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296771 ID=CX296771; Name=CX296771; organism=Citrus clementina; type=EST; length=736bp
TGCCGAATTCGGCACGAGGATTGAATCCTTTTATTTGTATTTGCTTTGAA
CTTGTACACTAAGTTTATGCTTAATTATTATAATAGCTGATAAGTAATGT
TACACAAAGAATGAACTTATTTACAAATCAAAGAACAAAAAATTATCTAT
GACTGGTATCAATTCTCTTCTTCAATTGTAGGTGGAAATGTCCTCCCTAG
ATGATTGATTAAAAGCTACTTGGAATAATTCACCTAATGGTAACTAAGCA
AGAGAAATTTTATTCGGCCTCGGCGTTAGTTCAATTTTCTACTGTATGTT
GTTTTGGGATGATTCAAAGATAGCGCCCCAGTTGAATCAGCATCACACTA
ACATCATCAACTGAGCCCCGTGAAACAGAGAGATCTACAAGCTTCTTACA
CGCTAACATTGGTTCTGGTGCATCAATGCTTTGGCAAAAAGGGCGAGCAA
TGTCAATTGCTTCTTGATTACTGACCTTATCCCAGAGGCCATCAGATGCT
AAGATTAGGAACTCGTATTCGGGTTTGATTCGAATGATTTTAGTCTCTGG
CTCGGCTATGATCCATTGCTTAAGGTGCCGATCCCCAAGGGCTCTAGACA
CAGCTAGAGACCCCTGAACTCTCCATGTACCGTGACATAAATCAACATAG
CCGCCCATCGTCTCAATTCTGCTCTTTTCATCTTCCCTAGAGGGCCGGTG
GTCTGAAGTGAGTGCCTCGGCAAGCCTCCTCTGCTC
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