CX296803

Overview
NameCX296803
Unique NameCX296803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGA17_ARATH (Beta-galactosidase 17 OS=Arabidopsis thaliana GN=BGAL17 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.402e-92
Identity = 159/229 (69.43%), Postives = 193/229 (84.28%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLI 696
            II+YTTDGGT+ETL KGT+    V++AVDFSTG + WPIFKLQK+FNAPG+SPPLSSEFYTGWLTHWGEKI KTDA+FTA+ LEKILS+NGSAVLYM HGGTNFGFYNGANTG+ ESDY+PDLTSYDYDAPIKESGD+DNPKF+A++RV++K++ +  P    + ++  +G I++Q T  LFDL+ M DPADV+ S NP+SMESVGQMFGFLLY S +  K  G++L I
Sbjct:  244 IIVYTTDGGTKETLDKGTVPVADVYSAVDFSTGDDPWPIFKLQKKFNAPGRSPPLSSEFYTGWLTHWGEKITKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNGANTGSEESDYKPDLTSYDYDAPIKESGDIDNPKFQALQRVIKKYNASPHPISPSNKQRKAYGSIKMQMTTSLFDLVRMTDPADVITSANPISMESVGQMFGFLLYESSYIAKKSGNTLRI 472          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL8_ORYSJ (Beta-galactosidase 8 OS=Oryza sativa subsp. japonica GN=Os05g0539400 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 144/230 (62.61%), Postives = 173/230 (75.22%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLL-DMLDPADVVESENPLSMESVGQMFGFLLYVSEFGGKDYGSSLLI 696
            I+LYTTDGG    L  GTI  D VFAAVDF TG+  WPIF+LQK++N PGKS PLSSEFYTGWLTHWGE+IA TDA  TA  L++IL +NGSAVLYMAHGGTNFGFYNGANTG +ESDY+ DLTSYDYDAPI+E GDV N K+KA+RRV+ + +   L  +    E+A +G +++QK A LFD++ ++ D   V  SE PLSME +GQMFGFLLY SE+  K   S L I
Sbjct:  215 IMLYTTDGGAIGNLKNGTILQDDVFAAVDFDTGSNPWPIFQLQKEYNLPGKSAPLSSEFYTGWLTHWGERIATTDASSTAKALKRILCRNGSAVLYMAHGGTNFGFYNGANTGQNESDYKADLTSYDYDAPIREYGDVHNAKYKALRRVIHECTGIPLLQLPSKIERASYGLVEVQKVASLFDVIHNISDALKVAFSEQPLSMELMGQMFGFLLYTSEYQEKHSSSILSI 444          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_FELCA (Beta-galactosidase OS=Felis catus GN=GLB1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.371e-37
Identity = 85/214 (39.72%), Postives = 125/214 (58.41%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++L+TTDG   + L  G ++G  ++A VDF   A     F++Q++    G  P ++SEFYTGWL HWG+  ++   +  AS L  +L+   +  LYM  GGTNF ++NGAN       YQP  TSYDYDAP+ E+GD+ + K+ A+R V+ KF       + P   K  +G + LQK   + D L++L PA  ++S  PL+   V Q FGF+LY
Sbjct:  216 VLLFTTDGAHEKFLQCGALQG--IYATVDFGPDANITAAFQIQRKSEPRG--PLVNSEFYTGWLDHWGQPHSRVRTEVVASSLHDVLAHGANVNLYMFIGGTNFAYWNGANI-----PYQPQPTSYDYDAPLSEAGDLTD-KYFALRDVIRKFEKVPEGFIPPSTPKFAYGKVALQKLKTVEDALNVLCPAGPIKSLYPLTFIQVKQYFGFVLY 419          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_BOVIN (Beta-galactosidase OS=Bos taurus GN=GLB1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.339e-37
Identity = 84/216 (38.89%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 ERIILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            E ++L+TTDG     L  G ++G  ++A VDFS G      F LQ++F   G  P ++SEFYTGWL HWG++ +   +   A  L  +L+   +  +YM  GGTNF ++NGAN       YQP  TSYDYDAP+ E+GD+   K+ A+R +++KF+      + P   K  +G + L K   + D L++L P+  ++S  PL+   V Q FGF+LY
Sbjct:  212 EDVLLFTTDGVNERLLQCGALQG--LYATVDFSPGTNLTAAFMLQRKFEPTG--PLVNSEFYTGWLDHWGQRHSTVSSKAVAFTLHDMLALGANVNMYMFIGGTNFAYWNGANI-----PYQPQPTSYDYDAPLSEAGDL-TEKYFALRDIIQKFAKVPEGPIPPSTPKFAYGKVALNKLKTVEDALNILCPSGPIKSVYPLTFIDVKQYFGFVLY 417          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_MOUSE (Beta-galactosidase OS=Mus musculus GN=Glb1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36
Identity = 83/214 (38.79%), Postives = 124/214 (57.94%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            +IL+TTDG + + L  GT++   ++A VDF TG      F +Q++F   G  P ++SEFYTGWL HWG+  +       A+ L  +L++  +  LYM  GGTNF ++NGANT      Y+P  TSYDYDAP+ E+GD+   K+ A+R V++ F       + P   K  +G + L+K   + + L +L P   V+S  PL+   V Q FG++LY
Sbjct:  216 VILFTTDGASEKMLKCGTLQD--LYATVDFGTGNNITQAFLVQRKFEPKG--PLINSEFYTGWLDHWGKPHSTVKTKTLATSLYNLLARGANVNLYMFIGGTNFAYWNGANT-----PYEPQPTSYDYDAPLSEAGDL-TKKYFALREVIQMFKEVPEGPIPPSTPKFAYGKVALRKFKTVAEALGILCPNGPVKSLYPLTFTQVKQYFGYVLY 419          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_CANFA (Beta-galactosidase OS=Canis familiaris GN=GLB1 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 82/214 (38.32%), Postives = 122/214 (57.01%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++L+TTDG   + L  G ++G  ++A VDF  GA     F++Q++  +  K P ++SEFYTGWL HWG+  +    +  AS L  IL+   +  LYM  GGTNF ++NGAN       YQ   TSYDYDAP+ E+GD+   K+ A+R V+ KF       + P   K  +G + L+K   + + L++L P   + S  PL+   V Q FGF++Y
Sbjct:  216 VLLFTTDGANEKFLQCGALQG--LYATVDFGPGANITAAFQIQRK--SEPKGPLVNSEFYTGWLDHWGQPHSTVRTEVVASSLHDILAHGANVNLYMFIGGTNFAYWNGAN-----MPYQAQPTSYDYDAPLSEAGDL-TEKYFALREVIRKFEKVPEGFIPPSTPKFAYGKVALKKLKTVEEALNVLCPPGPINSLYPLTFIQVKQYFGFVMY 419          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_MACFA (Beta-galactosidase OS=Macaca fascicularis GN=GLB1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 82/214 (38.32%), Postives = 122/214 (57.01%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++L+TTDG     L  G ++G  ++  VDF  G+     F++Q++    G  P ++SEFYTGWL HWG+  +    +  AS L  IL++  S  LYM  GGTNF ++NGAN     S Y    TSYDYDAP+ E+GD+   K+ A+R V++KF       + P   K  +G + L+K   +   LD+L P+  ++S  PL+   V Q +GF+LY
Sbjct:  215 VVLFTTDGAHETFLQCGALQG--LYTTVDFGPGSNITDAFQIQRKCEPKG--PLINSEFYTGWLDHWGQPHSTIKTEVVASSLYDILARGASVNLYMFIGGTNFAYWNGAN-----SPYAAQPTSYDYDAPLSEAGDL-TEKYFALRNVIQKFEKVPEGPIPPSTPKFAYGKVSLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQYYGFVLY 418          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_PONAB (Beta-galactosidase OS=Pongo abelii GN=GLB1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35
Identity = 82/214 (38.32%), Postives = 122/214 (57.01%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++L+TTDG  +  L  G ++G  ++  VDF TG+     F  Q++    G  P ++SEFYTGWL HWG+  +    +  AS L  IL++  S  LYM  GGTNF ++NGANT      Y    TSYDYDAP+ E+GD+   K+ A+R +++KF       + P   K  +G + L+K   +   LD+L P+  ++S  PL+   V Q +GF+LY
Sbjct:  215 VVLFTTDGAHKTFLKCGALQG--LYTTVDFGTGSNITDAFLSQRKCEPKG--PLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANT-----PYAAQPTSYDYDAPLSEAGDL-TEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVALEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLY 418          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: BGAL_HUMAN (Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.734e-35
Identity = 82/214 (38.32%), Postives = 122/214 (57.01%), Query Frame = 1
Query:   10 IILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++L+TTDG  +  L  G ++G  ++  VDF TG+     F  Q++    G  P ++SEFYTGWL HWG+  +    +  AS L  IL++  S  LYM  GGTNF ++NGAN     S Y    TSYDYDAP+ E+GD+   K+ A+R +++KF       + P   K  +G + L+K   +   LD+L P+  ++S  PL+   V Q +GF+LY
Sbjct:  215 VVLFTTDGAHKTFLKCGALQG--LYTTVDFGTGSNITDAFLSQRKCEPKG--PLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGAN-----SPYAAQPTSYDYDAPLSEAGDL-TEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLY 418          
BLAST of CX296803 vs. ExPASy Swiss-Prot
Match: GLB1L_MOUSE (Beta-galactosidase-1-like protein OS=Mus musculus GN=Glb1l PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35
Identity = 84/216 (38.89%), Postives = 121/216 (56.02%), Query Frame = 1
Query:    4 ERIILYTTDGGTRETLMKGTIRGDAVFAAVDFSTGAEAWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNSESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDMLDPADVVESENPLSMESVGQMFGFLLY 651
            ++I+L+TTDG     L  G+++G  ++  +DF        IF L +++   G  P ++SE+YTGWL +WG+  +   +   A  LEK+L    S  +YM HGGTNFG++NGA   + +  + P  TSYDYDAPI E+GD   PK  AIR V+ KF    L  + P + K  FGP+ +     L   LD L P   + S  PL+ E+V    GF+LY
Sbjct:  207 DKILLFTTDGP--HGLRCGSLQG--LYTTIDFGPADNVTRIFSLLREYEPHG--PLVNSEYYTGWLDYWGQNHSTRSSPAVAQGLEKMLKLGASVNMYMFHGGTNFGYWNGA---DEKGRFLPITTSYDYDAPISEAGD-PTPKLFAIRNVISKFQEIPLGPLPPPSPKMKFGPLTMSLDGNLLSFLDFLCPQGPIHSVLPLTFEAVKLDHGFMLY 412          
The following BLAST results are available for this feature:
BLAST of CX296803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
BGA17_ARATH7.402e-9269.43Beta-galactosidase 17 OS=Arabidopsis thaliana GN=B... [more]
BGAL8_ORYSJ1.147e-7662.61Beta-galactosidase 8 OS=Oryza sativa subsp. japoni... [more]
BGAL_FELCA1.371e-3739.72Beta-galactosidase OS=Felis catus GN=GLB1 PE=2 SV=... [more]
BGAL_BOVIN2.339e-3738.89Beta-galactosidase OS=Bos taurus GN=GLB1 PE=2 SV=1[more]
BGAL_MOUSE4.411e-3638.79Beta-galactosidase OS=Mus musculus GN=Glb1 PE=2 SV... [more]
BGAL_CANFA9.826e-3638.32Beta-galactosidase OS=Canis familiaris GN=GLB1 PE=... [more]
BGAL_MACFA1.283e-3538.32Beta-galactosidase OS=Macaca fascicularis GN=GLB1 ... [more]
BGAL_PONAB2.859e-3538.32Beta-galactosidase OS=Pongo abelii GN=GLB1 PE=2 SV... [more]
BGAL_HUMAN3.734e-3538.32Beta-galactosidase OS=Homo sapiens GN=GLB1 PE=1 SV... [more]
GLB1L_MOUSE8.318e-3538.89Beta-galactosidase-1-like protein OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC05803A04SK FerrChloL1 Citrus clementina cDNA clone C05803A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296803 ID=CX296803; Name=CX296803; organism=Citrus clementina; type=EST; length=696bp
TGGGAAAGAATAATTTTGTATACTACAGATGGAGGTACAAGGGAAACTCT
TATGAAAGGAACCATCCGTGGAGACGCCGTCTTTGCAGCTGTTGACTTCT
CAACGGGTGCTGAGGCATGGCCTATATTTAAGTTACAAAAGCAGTTCAAT
GCACCAGGAAAGTCACCACCGCTTTCTTCGGAATTTTATACAGGTTGGCT
TACACACTGGGGAGAGAAGATTGCGAAGACGGATGCTGATTTTACCGCAT
CTTATCTAGAGAAGATTTTGTCACAAAATGGTTCTGCTGTGCTTTATATG
GCACATGGTGGGACAAACTTTGGATTTTACAACGGAGCAAATACTGGTAA
CAGTGAGTCTGATTACCAGCCAGATCTCACTTCCTATGATTATGATGCAC
CAATTAAGGAATCTGGTGATGTTGATAACCCAAAGTTCAAAGCAATCAGG
AGGGTGGTAGAGAAATTTAGTCCAGCATCTCTTCCTTCTGTTCTTCCTGA
TAATGAGAAGGCAGGATTTGGACCTATTCAGTTACAGAAAACAGCATTGT
TATTTGACTTACTCGACATGCTAGATCCTGCAGATGTAGTTGAATCTGAA
AACCCACTTTCAATGGAGTCTGTGGGTCAGATGTTTGGATTTCTATTGTA
TGTTTCTGAATTTGGTGGAAAGGACTATGGAAGCAGTCTTCTTATA
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