CX296804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.065e-31 Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 288 + +PLD LIR LA HE+LITVEEGS+GGFGSHV FL L G+LDG LK R MVLPDRYIDHG+PADQL E+GL HI+AT L+L+G P+EAL Sbjct: 621 RFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.817e-31 Identity = 63/98 (64.29%), Postives = 80/98 (81.63%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 294 + +PLD LIR+LA+ HE+L+TVEEGS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL I Sbjct: 617 RFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAI 714
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30 Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 288 + +PLD LIR LA HE+L+TVE+GS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL Sbjct: 620 RFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREAL 715
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23 Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 270 + +P+D LIR+LA +HE+LITVEEGS+GGFGS+V HFL SG+LD LK+R MVLPD + D +PA Q +E+GL++RHI T L LG Sbjct: 541 RFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.036e-23 Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 288 + ++PLD +LI +LA EHE+LITVEEGSVGGFGSHV H L G LD LK+R + LPD +++H +PA Q E+ GL++ I ATVL+ LG + + Sbjct: 547 RFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEARSVV 642
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.650e-22 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 294 + ++PLD +L+ +LA EHEILIT+EEGS+GGFGSHV +L G+LDG LK+RSMVLPD + DH +PA +GL ++ I V LG+ A ++ Sbjct: 541 RFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYTAEVV 638
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.305e-21 Identity = 47/91 (51.65%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 273 + ++PLD +L+ +LA +HEILIT+EEGS+GGFGSHV +L G+LDG LK+RSMVLPD + DH +PA +GL ++ I V +LG+ Sbjct: 541 RFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.704e-21 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 285 + ++PLD DL+ +LANEHEILIT+EEGS+GGFGSHV L+ G LDG +K+R+MVLPD ++DH +PA +GL ++ I V LG+ A Sbjct: 538 RFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.704e-21 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGP-LKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 285 + +PLD DL+R+LA HE+LIT+EEGSVGGFGS V L G+LDG LK RSMVLPD ++DH P ++GL ++ I A VL+ LGR EA Sbjct: 541 RFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKFRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636
BLAST of CX296804 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21 Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 1 KILQPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 285 + +PLD DLIR+LA EHE+L+TVEEGS+GGFG+HV HFL G+L+ LK+R +V+PD ++D P ++GL + I TV + LG+ ++A Sbjct: 553 RFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647 The following BLAST results are available for this feature:
BLAST of CX296804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296804 ID=CX296804; Name=CX296804; organism=Citrus clementina; type=EST; length=523bpback to top |