CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296809_ssr178 microsatellite CX296809_ssr178:178..189. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15362 contig Ccv1_Contig15362:509..1068. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 3.146e-43
Identity = 84/140 (60.00%), Postives = 102/140 (72.86%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYPA 437
            N+PH++  D TIAGY +PKGSHV+LSR GLGRNP VW +PL+F P+RH+ +       V L E +LRF+SFS GRRGC+  +LG+ MSVML  RLLQGF WS P+  E VDLSESK D  MA PL   A+PRLPA LYP+
Sbjct:  419 NVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAAS---DVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSESKSDTFMATPLVLHAEPRLPAHLYPS 555          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.461e-40
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            NLPH+ST D  + GYFIPKGSHVL+SR+G+GRNP+VW  P KF PERH+ +    +  V+L E++L  +SFS GRRGCMG+ +GS M+ MLLARL+QGF W     +  +D+SESK DL MAKPL+A A PRL   +YP
Sbjct:  394 NLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLST----NTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAKPLYAVATPRLAPHVYP 528          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39
Identity = 80/139 (57.55%), Postives = 96/139 (69.06%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            NLPH++  DAT+AGY IPKGS VLLSR GLGRNP VW DPL F PERH+    +    V L E +LRF+SFS G+RGC   ALG+ ++ MLLARLLQGF W  P +E  V+L ES  D+ +AKPL    + RLP  LYP
Sbjct:  405 NLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVELMESSHDMFLAKPLVMVGELRLPEHLYP 539          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.368e-38
Identity = 77/136 (56.62%), Postives = 95/136 (69.85%), Query Frame = 3
Query:   27 HLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            HL+ +D T+ GYFIPKGSH+ + R GLGRNP +WKDPL + PERH+   D    +V L ETE+RF+SFS GRRGC+G+ +G+ M VMLLAR LQGFNW    D   + L E    LLMAKPLH   +PRL  +LYP
Sbjct:  400 HLARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYKPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCIGVKVGTIMMVMLLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLHLSVEPRLAPNLYP 534          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 3.980e-38
Identity = 78/139 (56.12%), Postives = 94/139 (67.63%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            NLPH++  D T+AGY IPKGS VLLSR GLGRNP VW DPL F PERH+    +    V L E +LRF+SFS G+RGC   ALG+ ++ M+LARLLQGF W  P +E  V+L ES  D+ +AKPL      RLP  LYP
Sbjct:  404 NLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVELMESSHDMFLAKPLVMVGDLRLPEHLYP 538          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 2.580e-37
Identity = 74/137 (54.01%), Postives = 95/137 (69.34%), Query Frame = 3
Query:   24 PHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            PH++ +D T+ GYFIPKGSH+ + R GLGRNP +WKDPL + PERH+   D    +V L ETE+RF+SFS GRRGC+G+ +G+ M  M+LAR LQGFNW    D   + L E    LLMAKPL    +PRL ++LYP
Sbjct:  398 PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEEDDASLLMAKPLLLSVEPRLASNLYP 533          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.369e-37
Identity = 76/139 (54.68%), Postives = 93/139 (66.91%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRLPADLYP 434
            NLPH++  D T+AGY IPKGS VLLSR GLGRNP VW DPL F PERH+    +    V L E +LRF+SFS G+RGC   ALG+ ++ M+LARLLQGF W     E  V+L ES  D+ ++KPL    + RL  DLYP
Sbjct:  406 NLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSE----VTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVLVGELRLSEDLYP 540          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTP--SDEEMVDLSESK-CDLLMAKPLHARAKPRLPADLY 431
            LPH S  D  I GY IPKGS+V ++   + R+P VWK+P +F PER +         V++   + R L F  GRR C G  LG  +   +++ LL  F W+ P  +  E +D+SE+      M  P+ A A PRLP+DLY
Sbjct:  368 LPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFL------EEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPRLPSDLY 501          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.168e-19
Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDE--EMVDLSES-KCDLLMAKPLHARAKPRLPADLY 431
            +LP +++    I GYFIPKGS +LL+   + R+PN W DPL+F PER +        +V++   +   + F  GRR C GM LG  M  +++A L+  FNW   S +  EM+++ E+    L  A PL    +PRL A  Y
Sbjct:  372 SLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPG--GEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHPRPRLEAQAY 510          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.058e-19
Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPRLPADLYPAN 440
            NLP +S+   TI GY+IPK + + ++   +GR+P+VW++PL+FIPER +    + + ++E    +   + F  GRR C G  +G  M   +L  L+  F+W  P+D   +++ E+    L  A PL A   PRL  D+Y ++
Sbjct:  372 NLPRVSSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFL---SEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAIVTPRLSFDIYQSS 510          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
C79A1_SORBI3.146e-4360.00Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79A2_ARATH1.461e-4057.55Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79B1_SINAL2.110e-3957.55Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79F1_ARATH1.368e-3856.62Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C79B2_ARATH3.980e-3856.12Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79F2_ARATH2.580e-3754.01Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C79B3_ARATH3.369e-3754.68Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C98A3_ARATH1.857e-1939.29Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
F3PH_PETHY3.168e-1937.59Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C75A2_SOLME7.058e-1934.51Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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