CX296810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296810 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = -2 Query: 257 SEEVAEDKAKPSCRIRHEGAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 574 +++ +D KP R AFFVFME+FRK +KE HPNNKSVA VGKA G+KWK ++ EKAPF+ +AEKRK +Y KN+Q YNK+ A G AAEE ESDKS+SEVN Sbjct: 26 TKKAVKDPNKPK---RPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG--AAEEEESDKSRSEVN 126
BLAST of CX296810 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27 Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = -2 Query: 257 EVAEDKAKPSCRIRHEGAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 568 + A+D KP R AFFVFMEEFRK F + HP NK+V+ VGKAAG KWK+MS+ EKAP+V ++EKRK +Y KNM+ YNK+ A+G +E ES+KS SEVN Sbjct: 36 KAAKDPNKPK---RPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVN 136
BLAST of CX296810 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.789e-24 Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 257 GRRFISEEVAEDKAKPSCRIRHEGAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAAEENESDKSKSEVN 589 G++ + +D KP R AFFVFM +FR+Q+K+ HPNNKSVA VGKA GE+WKS+SE+EKAP+V+RA K+K +Y +Q YNK+L +E SDKSKSEVN Sbjct: 30 GKKPAKGKEPKDPNKPK---RPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLE---GKDDEEGSDKSKSEVN 134
BLAST of CX296810 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 60/112 (53.57%), Postives = 74/112 (66.07%), Query Frame = -2 Query: 257 EVAEDKAKPSCRIRHEGAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGVNAA--------EENESDKSKSEVN 568 + +D KP R AFFVFMEEFRK+FKE +P NKSVA VGKAAG++WKS+SE +KAP+V +A K K +YNK + YNK + A +E ESDKSKSEVN Sbjct: 33 KAGKDPNKPK---RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVN 141
BLAST of CX296810 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23 Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = -2 Query: 257 EVAEDKAKPSCRIRHEGAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYN-----------KQLADGVNAAEENESDKSKSEVN 568 + +D KP R AFFVFM EFR++FK+ +P NKSVA VGKAAGE+WKS+SE EKAP+V +A K K +YNK + YN K A V +E ESDKSKSE+N Sbjct: 34 KAGKDPNKPK---RAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEIN 145 The following BLAST results are available for this feature:
BLAST of CX296810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296810 ID=CX296810; Name=CX296810; organism=Citrus clementina; type=EST; length=713bpback to top |