CX296811

Overview
NameCX296811
Unique NameCX296811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:1005..1721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 69/117 (58.97%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KR+AIDTKNQADSVVYQTEKQLKELG+KVPA             K+AI  GSTQ +KD +AALNQEVMQLGQSLYNQ                  +  S  +G +GDVIDADFTDSK
Sbjct:  590 KREAIDTKNQADSVVYQTEKQLKELGEKVPAPVKEKVEAKLGELKEAITGGSTQTIKDALAALNQEVMQLGQSLYNQPGAAGQAGPTPPGSESGPSESSGKEGPEGDVIDADFTDSK 706          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: HSP7S_SPIOL (Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) OS=Spinacia oleracea GN=CHSP70 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 55/77 (71.43%), Postives = 58/77 (75.32%), Query Frame = -2
Query:  384 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQ 614
            KR+ IDTKNQADSVVYQTEKQLKELG+KVP              KDAI  G TQA+KD MAALNQEVMQLGQSLYNQ
Sbjct:  470 KREVIDTKNQADSVVYQTEKQLKELGEKVPVPVKEKVEAKLGELKDAINGGETQAIKDAMAALNQEVMQLGQSLYNQ 546          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMP (Chaperone protein dnaK2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 48/117 (41.03%), Postives = 67/117 (57.26%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KR+ ID KNQA+++VYQTEKQL ELGDKV A             K+A ++   +AMK  +  L QE+  +G S+Y Q                  +++S++KG D DVIDADFT++K
Sbjct:  523 KREKIDLKNQAETLVYQTEKQLGELGDKVDASAKAKVEEKSKALKEATSKEDYEAMKKLLEELQQELYAIGSSVYQQ------PGNQPPAPGTPDSNESNDKGGDDDVIDADFTETK 633          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK_PROM5 (Chaperone protein dnaK OS=Prochlorococcus marinus (strain MIT 9515) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KR+ ID KNQA+++VYQTEKQL ELGDKV               K+A ++    +MK  +  L QE+  +G S+Y Q                  A+ S +KG D DVIDADFT++K
Sbjct:  523 KREKIDLKNQAETLVYQTEKQLGELGDKVDDSAKAKVEEKSKALKEATSKEDYDSMKKLLEELQQELYAIGSSVYQQ------PGNQPPAPGGPNANASDDKGPDDDVIDADFTETK 633          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KRD ID KNQA+++VYQTEKQL ELGDKV               K+A  +   + MK  +  L +E+  LG S+Y Q                   S++S +G D DVIDA+FT+SK
Sbjct:  523 KRDRIDIKNQAETLVYQTEKQLGELGDKVDEEAKAKVEAKRIQLKEATEKDDYETMKTLVEDLQKELYSLGASVYQQ-----SNAASQAADGTSSESNNSTEGND-DVIDAEFTESK 633          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNE7 (Chaperone protein dnaK2 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK2 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            +R+ ID KNQAD++VYQ+EKQL ELGDK+ A             KDA+A      +K  +  L Q +   G S+Y Q                  +S SS+   D DVIDA+F++SK
Sbjct:  523 RRERIDLKNQADTLVYQSEKQLSELGDKISADEKSKVEGFIQELKDALAAEDYDKIKSIIEQLQQALYAAGSSVYQQ-----ASAEASANAQAGPSSSSSSSSGDDDVIDAEFSESK 634          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNP6 (Chaperone protein dnaK 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            +R+ ID KNQAD++VYQ+EKQL ELGDK+ A             KDA+A      ++  +  L Q +   G S+Y Q                  +S SS+   D DVIDA+F++SK
Sbjct:  523 RRERIDLKNQADTLVYQSEKQLSELGDKISADEKSKVEGFIQELKDALAAEDYDKIRSIIEQLQQALYAAGSSVYQQ-----ASAEASANAQAGPSSSSSSSSGDDDVIDAEFSESK 634          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KR+ ID KNQA+++VYQ EKQ+ ELGDKV               K+A  +   ++MK  +  L QE+  LG S+Y Q                   S++ +K    DVIDADFT++K
Sbjct:  523 KREKIDIKNQAETLVYQAEKQIGELGDKVDEAAKAKVEEKRIKLKEATEKDDYESMKTLVEELQQELYSLGASVYQQ---------ANDASQAAADSNTDSKVDGDDVIDADFTETK 630          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = -2
Query:  264 NSARGKRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDG--DVIDADFTDSK 629
            +S + +R+ I+ KNQADS+ YQ EKQL+ELGDKVP              ++A+A+   + +K     L Q +  +G ++Y Q                    D      DG  DVIDADFT++K
Sbjct:  518 SSDKERREKIERKNQADSLAYQAEKQLQELGDKVPEADKTKVEGLVKDLREAVAKEDDEQIKKLTPELQQALFAVGSNIYQQ--------AGGGAAPGAAPQDGGTTSSDGGDDVIDADFTETK 633          
BLAST of CX296811 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMM (Chaperone protein dnaK2 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11
Identity = 45/117 (38.46%), Postives = 57/117 (48.72%), Query Frame = -2
Query:  264 KRDAIDTKNQADSVVYQTEKQLKELGDKVPAXXXXXXXXXXXXXKDAIAEGSTQAMKDTMAALNQEVMQLGQSLYNQXXXXXXXXXXXXXXXXXXASDSSNKGQDGDVIDADFTDSK 614
            KR+ ID KNQA+++VYQ EKQL EL DKV A             K AI +    AMK  +  L QE+  +G S+Y Q                   S S +     DVIDA+FT+SK
Sbjct:  523 KRERIDIKNQAETLVYQAEKQLGELADKVDADSKAKVEDKRVKLKAAIEKDDFDAMKSLLEELQQELYTVGASVYQQAGAAAAESGADAGAAGAGDSSSGD-----DVIDAEFTESK 634          
The following BLAST results are available for this feature:
BLAST of CX296811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
HSP7S_PEA3.512e-2858.97Stromal 70 kDa heat shock-related protein, chlorop... [more]
HSP7S_SPIOL1.867e-2171.43Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK2_PROMP7.596e-1541.03Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PROM54.168e-1340.17Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK2_PROMA3.529e-1240.17Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK2_SYNE77.861e-1237.61Chaperone protein dnaK2 OS=Synechococcus elongatus... [more]
DNAK2_SYNP61.751e-1136.75Chaperone protein dnaK 2 OS=Synechococcus sp. (str... [more]
DNAK_PROMT2.987e-1136.75Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK2_ANASP2.987e-1133.87Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK2_PROMM6.655e-1138.46Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
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Properties
Property NameValue
Genbank descriptionC05803B02SK FerrChloL1 Citrus clementina cDNA clone C05803B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296811 ID=CX296811; Name=CX296811; organism=Citrus clementina; type=EST; length=717bp
GCCGAATTCGGCACGAGGCGAAGCTTTATCATTCTCAATATGCTTTAAAT
AAAAACAGCTTTGGCCGTAATGGCAATGGTTCTGCTTTTAGTGTTCCTAC
TTAGTATCTCTACCATCCTCGATATTCCTAAAATCAATTCAACTCTGTTA
TCCATGCATCAAAAATGACTGGAGACATAACCCAAGTTATATCACATCCC
GCCAAAATCAAATTCTTATACACATCCAATAAATTAGGAAGACAAAAACT
AGGCAGATTTTCACTTGCTGTCAGTGAAATCTGCATCGATGACATCACCA
TCCTGTCCTTTGTTGGATGAGTCTGAAGCTCCAGCCTCAGCACCAGGAGT
AGGTCCAGCGCCAGGTGCAGCCCCAGCTCCTGGTTGGTTGTAAAGGGACT
GGCCAAGCTGCATAACTTCTTGGTTAAGGGCGGCCATAGTGTCCTTCATT
GCTTGGGTTGAACCCTCTGCAATTGCATCCTTGAGCTCCTTGAGTTTTCC
TTCGACCTTCCCCTTCACTTCGGCTGGAACCTTGTCTCCCAGCTCCTTCA
GCTGTTTCTCCGTTTGGTATACGACAGAATCCGCCTGGTTCTTGGTGTCA
ATAGCATCTCTTTTCCCTCGTGCCGAATTCGGCACGAGGTTTATTCTGGT
TACTATTATTTAGGACATACAAGTATAATAGCATCGGAACTCTTCGTGCT
CAGAATGCATAATGGAA
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