CX296818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296818 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.721e-64 Identity = 118/167 (70.66%), Postives = 136/167 (81.44%), Query Frame = -3 Query: 192 SSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFXXXXXXXXXXXXXXIWDT 692 S++ S T +S+GDSILLIVALCFHSVFEGIAIG++ET++DAW+ALWTI LHKIFAAIAMGIALLRMIPDRP S + Y+FAFAISSP+GVAIGI+IDATTQG +ADWIFA+SM LACGVF+YVS+NHLL+KGY P K V VD P YKF IWDT Sbjct: 160 SNQRSATTETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWDT 326
BLAST of CX296818 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51 Identity = 96/162 (59.26%), Postives = 120/162 (74.07%), Query Frame = -3 Query: 195 SLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFXXXXXXXXXXXXXXIWD 680 +L S GD+ LLI ALCFHS+FEGIAIG+++T++DAW+ LWTI LHK+FAA+AMGIALL++IP RPF V Y+FAF ISSP+GV IGI I+AT+QG DW +AISMGLACGVF+YV++NHL+SKGY P++ D P YKF IWD Sbjct: 192 ALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353
BLAST of CX296818 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14 Identity = 41/128 (32.03%), Postives = 73/128 (57.03%), Query Frame = -3 Query: 297 LTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRP-FLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSK 677 +T S++ +L++AL HS+FEG+A+GV ++ + L I HKI A+ A+GI+ + ++P FL F F+++SP+G +G++I G + I G+A G F+YV++ ++ K Sbjct: 528 VTKKSNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAVVEIIPK 653
BLAST of CX296818 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = -3 Query: 303 GHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLL 698 GH A SS S +L ++L HSVFEG+AIG+ T A + I +HK ++ + L++ +P L V Y FAI SP+G+ IGI++ T+ I A+ GLA G FIY++ +L Sbjct: 144 GHHVHVDFHAHSSFR-SFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAV-KP-LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYITFLEIL 271
BLAST of CX296818 vs. ExPASy Swiss-Prot
Match: ZNTC_DICDI (Protein zntC OS=Dictyostelium discoideum GN=zntC PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 47/145 (32.41%), Postives = 78/145 (53.79%), Query Frame = -3 Query: 294 NGTDGHSSKFSLTA----ASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALW-TICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPV-ADWIFAISMGLACGVFIYVSINHLLSKG 710 + ++GHS K + SS + + +VAL HS+F+G+ +G +ETQ D++ L + HK + +GIA+ F SC+A FA A+ +P+G+ IG+ I + + A + I + + CG FIY+S+ LL G Sbjct: 232 HSSNGHSHKDEKDSEKVNVSSKSKAWVFLVALSLHSIFDGLGLG-SETQKDSFYGLLIAVLAHKFLDGLVLGIAIKYAYFSFKF-SCIALVFAAAM-TPLGIGIGMAISSAYESSTDAYLVKGIILSITCGSFIYISLIELLPSG 373 The following BLAST results are available for this feature:
BLAST of CX296818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296818 ID=CX296818; Name=CX296818; organism=Citrus clementina; type=EST; length=715bpback to top |