CX296824

Overview
NameCX296824
Unique NameCX296824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length396
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1039 contig Ccv1_Contig1039:199..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296824 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.376e-14
Identity = 41/83 (49.40%), Postives = 48/83 (57.83%), Query Frame = 3
Query:    6 SALVADGISNAIYKRGYSAASQXXXXXXXXXXXXXXXMLKKPAEEMTGSSEKVSWVPDPVTGVYRPENLANELDGADLRAMFL 254
            SALVADG SN   + G++AA+                M+ K  EE     EKVSWVPDPVTG YRPEN  NE+D AD+RA  L
Sbjct:   12 SALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93          
The following BLAST results are available for this feature:
BLAST of CX296824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARG2_PHAAU9.376e-1449.40Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionC05803C03SK FerrChloL1 Citrus clementina cDNA clone C05803C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296824 ID=CX296824; Name=CX296824; organism=Citrus clementina; type=EST; length=396bp
GAGGCTCTGCTCTCGTCGCTGACGGAATCTCTAACGCCATCTACAAAAGA
GGATACTCGGCGGCATCACAAGGCGCTGTGTCGCGGGCAACAGGGGGAGC
TAGGAGTGCTGCTGCGATGTTGAAGAAACCAGCAGAAGAGATGACAGGAT
CCAGTGAGAAGGTCTCGTGGGTCCCAGACCCAGTCACTGGTGTCTACAGG
CCGGAGAATCTCGCCAACGAGCTCGATGGGGCCGACCTCAGAGCCATGTT
CTTGAAGCACAACAACTGATCATCAAAGTTAATAAGTATTATTATTAATA
TATATTAATTCGGACATGGAAACTGAGGAAGGACGAAAGAAAAATTAAAA
AAAGGTTAAAAAGGGAGCTGCAGCTGCTACGCCAATTTCCCGGAAT
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